RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 NPPAP01160 153 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ARF5P84085 180 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 RAD51Q06609 339 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 FADDQ13158 208 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 MADCAM1Q13477 382 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SERINC3Q13530 473 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PTPRNQ16849 979 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 KDM4DQ6B0I6 523 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 MRNIPQ6NTE8 343 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 HIPK1Q86Z02 1210 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ENTHD1Q8IYW4 607 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CADM2Q8N3J6 435 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PAF1Q8N7H5 531 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SP7Q8TDD2 431 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 NECTIN4Q96NY8 510 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 FYTTD1Q96QD9 318 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 ARPC5LQ9BPX5 153 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 KCNS3Q9BQ31 491 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 HTATIP2Q9BUP3 242 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PRRG3Q9BZD7 231 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ABCB8Q9NUT2 735 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 EHD3Q9NZN3 535 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 FNIP2Q9P278 1114 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 NDRG4Q9ULP0 352 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 SLC6A14Q9UN76 642 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 LTBP2Q14767 1821 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 DRGXA6NNA5 263 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 TFECO14948 347 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 CD160O95971 181 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PGRP06401 933 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CTPS1P17812 591 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 MSH3P20585 1137 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 AZGP1P25311 298 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 GDF5P43026 501 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CTSKP43235 329 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 GZMMP51124 257 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 VLDLRP98155 873 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ACVR1Q04771 509 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 IL18R1Q13478 541 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 TIGD6Q17RP2 521 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PLEKHG6Q3KR16 790 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZFP69Q49AA0 526 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 RUNDC3AQ59EK9 446 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SLX4IPQ5VYV7 408 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PSAPL1Q6NUJ1 521 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 GPR153Q6NV75 609 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 GET4Q7L5D6 327 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 GOLGA7Q7Z5G4 137 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 GALNT12Q8IXK2 581 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 UBQLNLQ8IYU4 475 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SLC38A6Q8IZM9 456 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 UMODL1-AS1Q8N2C9 162 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 LIX1Q8N485 282 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SMG7Q92540 1137 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZNF707Q96C28 371 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 CDKN2AIPNLQ96HQ2 116 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PYURFQ96I23 114 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 RPP25Q9BUL9 199 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 TRIM62Q9BVG3 475 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 NUAK2Q9H093 628 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 TRIM39Q9HCM9 518 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 TAS2R13Q9NYV9 303 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CCL27Q9Y4X3 112 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 KIAA1671Q9BY89 1806 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 IGLV3-10A0A075B6K4 115 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 A0A0G2JMP0 313 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 A0A0X1KG70 313 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 LOC285095A0A1B0GVY8 99 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SAGE2PA6NJ88 616 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 STX16O14662 325 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 FGF10O15520 208 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 KLK8O60259 260 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PTHP01270 115 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 TGM4P49221 684 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 RPP38P78345 283 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 GPLD1P80108 840 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZNF235Q14590 738 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CDK10Q15131 360 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 PTCHD3Q3KNS1 767 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZC3H12BQ5HYM0 836 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 CTSL3PQ5NE16 218 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZNF648Q5T619 568 aaPredicted RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 GPSM1Q86YR5 675 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 CYP4Z2PQ8N1L4 340 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 EFHBQ8N7U6 833 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 SETD9Q8NE22 299 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 OR4K2Q8NGD2 314 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ASIC4Q96FT7 647 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 ZNF382Q96SR6 550 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 COPS4Q9BT78 406 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 MMP28Q9H239 520 aa8.84□□□□□ -0.99
THBS3-211ENST00000541990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.84□□□□□ -0.99
THBS3-211ENST00000541990 MRPS23Q9Y3D9 190 aaKnown RBP8.84□□□□□ -0.99
THBS3-211ENST00000541990 SCELO95171 688 aa8.83□□□□□ -1
THBS3-211ENST00000541990 GUCA1CO95843 209 aa8.83□□□□□ -1
THBS3-211ENST00000541990 SERPINF2P08697 491 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms