RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 MIER2Q8N344 545 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 AVL9Q8NBF6 648 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 RBM15BQ8NDT2 890 aaKnown RBP26.7■■□□□ 1.86
CCM2-218ENST00000541586 IFI44Q8TCB0 444 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 EFCAB11Q9BUY7 163 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 TBC1D10AQ9BXI6 508 aa26.7■■□□□ 1.86
CCM2-218ENST00000541586 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.7■■□□□ 1.86
CCM2-218ENST00000541586 GEMIN8Q9NWZ8 242 aaKnown RBP26.7■■□□□ 1.86
CCM2-218ENST00000541586 CDH1P12830 882 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 PSMB5P28074 263 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 NME5P56597 212 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 YBX1P67809 324 aaKnown RBP26.69■■□□□ 1.86
CCM2-218ENST00000541586 IRX1P78414 480 aaPredicted RBP26.69■■□□□ 1.86
CCM2-218ENST00000541586 ZNF33BQ06732 778 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 SLBPQ14493 270 aaKnown RBP eCLIP26.69■■□□□ 1.86
CCM2-218ENST00000541586 TRIP6Q15654 476 aaKnown RBP26.69■■□□□ 1.86
CCM2-218ENST00000541586 PERM1Q5SV97 790 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 GK5Q6ZS86 529 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 C17orf64Q86WR6 236 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 RNF175Q8N4F7 328 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 OR7G3Q8NG95 312 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 OR6C4Q8NGE1 309 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 OR9I1Q8NGQ6 314 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 BAHD1Q8TBE0 780 aaPredicted RBP26.69■■□□□ 1.86
CCM2-218ENST00000541586 CCDC167Q9P0B6 97 aa26.69■■□□□ 1.86
CCM2-218ENST00000541586 CFAP73A6NFT4 308 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 GYG2O15488 501 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 TNFSF14O43557 240 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 KDM1AO60341 852 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 ACADVLP49748 655 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 RPS6KA2Q15349 733 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 RSPO4Q2I0M5 234 aaPredicted RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 GLIPR1L2Q4G1C9 344 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 MED27Q6P2C8 311 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 BRINP2Q9C0B6 783 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 LRTM1Q9HBL6 345 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 NQO1P15559 274 aaKnown RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 MRPL19P49406 292 aaKnown RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 OR1D5P58170 312 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 RPL38P63173 70 aaKnown RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 SMU1Q2TAY7 513 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 PAGE2BQ5JRK9 111 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 OR4E2Q8NGC2 313 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 NAT6Q93015 286 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 MTERF1Q99551 399 aaKnown RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.68■■□□□ 1.86
CCM2-218ENST00000541586 C1orf109Q9NX04 203 aa26.68■■□□□ 1.86
CCM2-218ENST00000541586 PCM1Q15154 2024 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 SLC30A4O14863 429 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 SEC22BO75396 215 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 RSL1D1O76021 490 aaKnown RBP26.67■■□□□ 1.86
CCM2-218ENST00000541586 MXRA7P84157 204 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 CSTF3Q12996 717 aaKnown RBP26.67■■□□□ 1.86
CCM2-218ENST00000541586 DDX39BQ13838 428 aaKnown RBP26.67■■□□□ 1.86
CCM2-218ENST00000541586 AMZ1Q400G9 498 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 ADNP2Q6IQ32 1131 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 ZFAND4Q86XD8 727 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 RBM12BQ8IXT5 1001 aaKnown RBP26.67■■□□□ 1.86
CCM2-218ENST00000541586 LCN9Q8WX39 176 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 CCDC3Q9BQI4 270 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 RTKNQ9BST9 563 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 SPNS1Q9H2V7 528 aa26.67■■□□□ 1.86
CCM2-218ENST00000541586 NOP53Q9NZM5 478 aaKnown RBP26.67■■□□□ 1.86
CCM2-218ENST00000541586 ASXL3Q9C0F0 2248 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 PCNX2A6NKB5 2137 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 PIPSLA2A3N6 862 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 TM4SF5O14894 197 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 CASC3O15234 703 aaKnown RBP26.66■■□□□ 1.86
CCM2-218ENST00000541586 PCNAP12004 261 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 EZRP15311 586 aaKnown RBP26.66■■□□□ 1.86
CCM2-218ENST00000541586 TYRP1P17643 537 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 MEF2AQ02078 507 aaPredicted RBP26.66■■□□□ 1.86
CCM2-218ENST00000541586 LAPTM5Q13571 262 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 IL23RQ5VWK5 629 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 FUNDC1Q8IVP5 155 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 LAS2Q8IYD9 372 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 REPS1Q96D71 796 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 C1orf21Q9H246 121 aa26.66■■□□□ 1.86
CCM2-218ENST00000541586 CUEDC1Q9NWM3 386 aaPredicted RBP26.66■■□□□ 1.86
CCM2-218ENST00000541586 POLR3HQ9Y535 204 aaPredicted RBP26.66■■□□□ 1.86
CCM2-218ENST00000541586 PRPH2P23942 346 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 ACP1P24666 158 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 CPOXP36551 454 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 MAD2L1Q13257 205 aaPredicted RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 CUL3Q13618 768 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 MAPRE2Q15555 327 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 HIST2H2ACQ16777 129 aaPredicted RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 NKAIN2Q5VXU1 208 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 HIST2H2AA3Q6FI13 130 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 AMIGO1Q86WK6 493 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 FAM129CQ86XR2 697 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 OR2A1Q8NGT9 310 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 HUS1BQ8NHY5 278 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 ZFPM2Q8WW38 1151 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 AHCYL2Q96HN2 611 aaKnown RBP26.65■■□□□ 1.86
CCM2-218ENST00000541586 SYNDIG1Q9H7V2 258 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 PELI2Q9HAT8 420 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 PCDHB11Q9Y5F2 797 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 RP1P56715 2156 aa26.65■■□□□ 1.86
CCM2-218ENST00000541586 NPIPB8E9PQR5 432 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms