RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 POLBP06746 335 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UQCRHP07919 91 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 PIRTP0C851 137 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 COX6A1P12074 109 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ICAM2P13598 275 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ABOP16442 354 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT2B7P16662 529 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A6P19224 532 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 MSH3P20585 1137 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A1P22309 533 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 IL1R2P27930 398 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 HMGCLP35914 325 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SPAM1P38567 509 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CD151P48509 253 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 DGKQP52824 942 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 PMP22Q01453 160 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ITGA9Q13797 1035 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF460Q14592 562 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 PAFAH1B3Q15102 231 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC122Q5T0U0 273 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC183Q5T5S1 534 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 GPRC6AQ5T6X5 926 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ABHD17BQ5VST6 288 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TXNRD3NBQ6F5E7 133 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CNSTQ6PJW8 725 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SHISA6Q6ZSJ9 500 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 NLRP9Q7RTR0 991 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TRIM73Q86UV7 250 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 C1QL4Q86Z23 238 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SIAH3Q8IW03 269 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CHERPQ8IWX8 916 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CFAP206Q8IYR0 622 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SIRT6Q8N6T7 355 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ACRBPQ8NEB7 543 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 WFDC11Q8NEX6 87 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 MYRIPQ8NFW9 859 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 OR52E1Q8NGJ3 308 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 HM13Q8TCT9 377 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 HSPH1Q92598 858 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ALG3Q92685 438 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TADA1Q96BN2 335 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 RMND5BQ96G75 393 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 RBM41Q96IZ5 413 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 OR2A14Q96R47 310 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 MESP1Q9BRJ9 268 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TRIM51Q9BSJ1 452 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 POLDIP3Q9BY77 421 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 LIME1Q9H400 295 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CLSTN2Q9H4D0 955 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TRABDQ9H4I3 376 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A7Q9HAW7 530 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A10Q9HAW8 530 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 UGT1A8Q9HAW9 530 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 BPIFA1Q9NP55 256 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 RIC8BQ9NVN3 520 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SMOXQ9NWM0 555 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 IL17CQ9P0M4 197 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CTSFQ9UBX1 484 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TEKT2Q9UIF3 430 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 C3orf18Q9UK00 162 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 CBLCQ9ULV8 474 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 NPIPA1Q9UND3 350 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 PLEKHA6Q9Y2H5 1048 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TMA7Q9Y2S6 64 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 LUC7L2Q9Y383 392 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 SPO11Q9Y5K1 396 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 TNPO3Q9Y5L0 923 aaKnown RBP4.37□□□□□ -1.71
SNHG1-214ENST00000540865 RTTNQ86VV8 2226 aa4.37□□□□□ -1.71
SNHG1-214ENST00000540865 ZANQ9Y493 2812 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IGLV3-12A0A075B6K2 115 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IGHV1-45A0A0A0MS14 117 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 GLYATL1P3A0A0U1RQE8 302 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM237BA0A1B0GVD1 139 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 NKX2-6A6NCS4 301 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 FAM90A27PA6NNH2 459 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IDSB3KWA1 339 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 HRKO00198 91 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 MFSD11O43934 449 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 NDST3O95803 873 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 LY6G6DO95868 133 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CHRM5P08912 532 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 KRT15P19012 456 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CXCR2P25025 360 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 EEF1GP26641 437 aaKnown RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 CFPP27918 469 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 AKT1P31749 480 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 SHMT2P34897 504 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 EMP2P54851 167 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 IFI35P80217 286 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 OCA2Q04671 838 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 ZNF33BQ06732 778 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 KLC1Q07866 573 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 RPA4Q13156 261 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 BOP1Q14137 746 aaKnown RBP4.36□□□□□ -1.71
SNHG1-214ENST00000540865 KRT81Q14533 505 aa4.36□□□□□ -1.71
SNHG1-214ENST00000540865 GRM7Q14831 915 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms