RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CSNK2BP67870 215 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 SEMA3AQ14563 771 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FBXO43Q4G163 708 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 LARP4Q71RC2 724 aaKnown RBP eCLIP8.43□□□□□ -1.06
DDB1-217ENST00000540166 CEP97Q8IW35 865 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 MFSD6LQ8IWD5 586 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 VANGL1Q8TAA9 524 aaPredicted RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 SLC7A6Q92536 515 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 DNASE1L2Q92874 299 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 TNKS2Q9H2K2 1166 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CATSPERBQ9H7T0 1116 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 NT5MQ9NPB1 228 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SNTG1Q9NSN8 517 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 ABCD2Q9UBJ2 740 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SLC12A8A0AV02 714 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 YJEFN3A6XGL0 299 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CXCR6O00574 342 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CCL22O00626 93 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ORC5O43913 435 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 SIX3O95343 332 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 SLC1A2P43004 574 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 SCRN3Q0VDG4 424 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PAFAH1B3Q15102 231 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 SYT6Q5T7P8 510 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 LCN1P1Q5VSP4 162 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ZNF691Q5VV52 312 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ERICH5Q6P6B1 374 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ZDHHC21Q8IVQ6 265 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PAPD5Q8NDF8 572 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 FGF14Q92915 247 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 FERD3LQ96RJ6 166 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TMEM245Q9H330 911 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ABCB9Q9NP78 766 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CD274Q9NZQ7 290 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 SLC2A6Q9UGQ3 507 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 WNT6Q9Y6F9 365 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 B4GALT3O60512 393 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PSIP1O75475 530 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 SCELO95171 688 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 SNX4O95219 450 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ALDOCP09972 364 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 SLC2A4P14672 509 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CCR1P32246 355 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MAGEA12P43365 314 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CHRNA4P43681 627 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 NUBP1P53384 320 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 FBXO48Q5FWF7 155 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TYW3Q6IPR3 259 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 CMTM8Q8IZV2 173 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 GLB1L3Q8NCI6 653 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 BRSK1Q8TDC3 778 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 BLOC1S5Q8TDH9 187 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PSMG2Q969U7 264 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ELSPBP1Q96BH3 223 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ZNF300Q96RE9 604 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 TM9SF2Q99805 663 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TRIM62Q9BVG3 475 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 DPY30Q9C005 99 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 HDHD2Q9H0R4 259 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PCDHB14Q9Y5E9 798 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 DOCK5Q9H7D0 1870 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ALPK3Q96L96 1907 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 FAM234BA2RU67 622 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MYBPHLA2RUH7 354 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PABPN1LA6NDY0 278 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 A8MUA0 341 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 CTDSP2O14595 271 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 AP3D1O14617 1153 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MITFO75030 526 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 ZNF780AO75290 641 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 RHOBTB1O94844 696 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 DDCP20711 480 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 XPAP23025 273 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 RYKP34925 604 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 WASP42768 502 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 ARCN1P48444 511 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 MXD1Q05195 221 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 SLAMF1Q13291 335 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 WSCD2Q2TBF2 565 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 COQ5Q5HYK3 327 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 NXNL2Q5VZ03 156 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ZNF549Q6P9A3 640 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MON1AQ86VX9 555 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TIGD4Q8IY51 512 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 DTWD1Q8N5C7 304 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 METTL6Q8TCB7 284 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 TSPEARQ8WU66 669 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 HMGB4Q8WW32 186 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 ISL2Q96A47 359 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MLPHQ9BV36 600 aaPredicted RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
DDB1-217ENST00000540166 USP22Q9UPT9 525 aa8.42□□□□□ -1.06
DDB1-217ENST00000540166 MN1Q10571 1320 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms