RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ACADSP16219 412 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 KRT20P35900 424 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 GRIA3P42263 894 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 NKX2-5P52952 324 aaPredicted RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 THOC5Q13769 683 aaKnown RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 CCDC58Q4VC31 144 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 ATP13A5Q4VNC0 1218 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 B3GNTL1Q67FW5 361 aaPredicted RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 WDR53Q7Z5U6 358 aaPredicted RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 MCATQ8IVS2 390 aaKnown RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 RHOT2Q8IXI1 618 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 C19orf47Q8N9M1 422 aaKnown RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 FBF1Q8TES7 1133 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 COQ7Q99807 217 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 NUDT9Q9BW91 350 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 CUTCQ9NTM9 273 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 NOVA2Q9UNW9 492 aaKnown RBP7.3□□□□□ -1.24
GNE-205ENST00000539815 SLC12A4Q9UP95 1085 aa7.3□□□□□ -1.24
GNE-205ENST00000539815 MN1Q10571 1320 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 A0A1B0GX78 115 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 GMNCA6NCL1 334 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 FCHO1O14526 889 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 IFNA16P05015 189 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 SERPING1P05155 500 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 HLA-DQB2P05538 268 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CYLC1P35663 651 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 EEF1A2Q05639 463 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 LIN52Q52LA3 116 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PRAMEF17Q5VTA0 474 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 NXNQ6DKJ4 435 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 C4orf22Q6V702 233 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 RBM43Q6ZSC3 357 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 PATL1Q86TB9 770 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 CCDC25Q86WR0 208 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 NAT14Q8WUY8 206 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PIH1D2Q8WWB5 315 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 ECHDC3Q96DC8 303 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 RHBGQ9H310 441 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CRNNQ9UBG3 495 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 ARID1AO14497 2285 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 HYKKA2RU49 373 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 TMEM191CA6NGB0 347 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CCT8L1PA6NM43 557 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 LINC01387J3KSC0 135 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 TJP3O95049 919 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 MMP11P24347 488 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 HMOX2P30519 316 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 OR1D4P47884 311 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 POLR2GP62487 172 aaKnown RBP eCLIP7.29□□□□□ -1.24
GNE-205ENST00000539815 PTSQ03393 145 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 MMRN1Q13201 1228 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 DPYSL2Q16555 572 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 KDELC1Q6UW63 502 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 POLNQ7Z5Q5 900 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 FAR2Q96K12 515 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PIP5K1AQ99755 562 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 UNKQ9C0B0 810 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 ATG10Q9H0Y0 220 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 MKL2Q9ULH7 1088 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PCDHGA6Q9Y5G7 932 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PCDH15Q96QU1 1955 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 ZNF821O75541 412 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 OR6B1O95007 311 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PKMP14618 531 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 NFKB1P19838 968 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 UQCRC1P31930 480 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 MC4RP32245 332 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 MAGEA1P43355 309 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CBX5P45973 191 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 ERFP50548 548 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CYLC2Q14093 348 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 GPR33Q49SQ1 333 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 WASH2PQ6VEQ5 465 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 ADGRG6Q86SQ4 1221 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 NRROSQ86YC3 692 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 GHDCQ8N2G8 530 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 UBL4BQ8N7F7 174 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PPP1R14CQ8TAE6 165 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 NR4A3Q92570 626 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 RND1Q92730 232 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 BTBD6Q96KE9 485 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PWWP2AQ96N64 755 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 INSM2Q96T92 566 aaPredicted RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 KIR3DX1Q9H7L2 352 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 ANKHQ9HCJ1 492 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 GPR27Q9NS67 375 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 EIF3LQ9Y262 564 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 MRPS33Q9Y291 106 aaKnown RBP7.29□□□□□ -1.24
GNE-205ENST00000539815 NEU2Q9Y3R4 380 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 SPEF1Q9Y4P9 236 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 PCDHGA11Q9Y5H2 935 aa7.29□□□□□ -1.24
GNE-205ENST00000539815 CFAP47Q6ZTR5 3102 aa7.28□□□□□ -1.24
GNE-205ENST00000539815 VPS13AQ96RL7 3174 aa7.28□□□□□ -1.24
GNE-205ENST00000539815 URADA6NGE7 173 aa7.28□□□□□ -1.24
GNE-205ENST00000539815 CLDN14O95500 239 aa7.28□□□□□ -1.24
GNE-205ENST00000539815 POU2F1P14859 743 aa7.28□□□□□ -1.24
GNE-205ENST00000539815 PAMP19021 973 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms