RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 STARD8Q92502 1023 aa19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 NELL1Q92832 810 aa19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 CPPED1Q9BRF8 314 aaPredicted RBP19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 TBCDQ9BTW9 1192 aa19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 YIPF3Q9GZM5 350 aa19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 ADGRE2Q9UHX3 823 aa19.52■□□□□ 0.72
PACSIN3-211ENST00000539589 MAGEB17A8MXT2 336 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 FAM220BPB1ANY3 271 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 C10orf142B7Z368 130 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 ACOX3O15254 700 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 TRPC1P48995 793 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 ZP2Q05996 745 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 PUS10Q3MIT2 529 aaKnown RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 LIN52Q52LA3 116 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 FOXB2Q5VYV0 432 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 OR4F3Q6IEY1 312 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 IYDQ6PHW0 289 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 LRRTM4Q86VH4 590 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 PHACTR4Q8IZ21 702 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 OR52E4Q8NGH9 312 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 HUS1BQ8NHY5 278 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 ASB12Q8WXK4 309 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 TFAP2CQ92754 450 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 FAM120BQ96EK7 910 aaKnown RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 APOOQ9BUR5 198 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 SGPP1Q9BX95 441 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 ANKRD60Q9BZ19 345 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 PHPT1Q9NRX4 125 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 USP36Q9P275 1121 aaKnown RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 CA5BQ9Y2D0 317 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 POM121BA6NF01 834 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 CHURC1-FNTBB4DL54 471 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 CXCR6O00574 342 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 GSNP06396 782 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 SMIM18P0DKX4 95 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 MYCLP1P12525 358 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 NPPBP16860 134 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 HOXB9P17482 250 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 PAX7P23759 505 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 ACADLP28330 430 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 PTPN6P29350 595 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 C21orf58P58505 322 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 TSTA3Q13630 321 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 C10orf62Q5T681 223 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 KRT80Q6KB66 452 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 UNC5DQ6UXZ4 953 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 CALHM3Q86XJ0 350 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 SPDYE1Q8NFV5 336 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 C11orf24Q96F05 449 aaPredicted RBP19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 BTBD1Q9H0C5 482 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 OR52A5Q9H2C5 316 aa19.51■□□□□ 0.71
PACSIN3-211ENST00000539589 CLOCKO15516 846 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 DEAF1O75398 565 aaPredicted RBP19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 MT-ND1P03886 318 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 CEACAM5P06731 702 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 COX7A2P14406 83 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 ASMTP46597 345 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 CLDN2P57739 230 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 RPA4Q13156 261 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 DUOXA1Q1HG43 343 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 SPIN4Q56A73 249 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 PAGE2BQ5JRK9 111 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 SYT13Q7L8C5 426 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 AMZ2Q86W34 360 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 ADHFE1Q8IWW8 467 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 OXR1Q8N573 874 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 FAM162AQ96A26 154 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 WDR34Q96EX3 536 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 AURKBQ96GD4 344 aaPredicted RBP19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 VPS50Q96JG6 964 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 EFCAB11Q9BUY7 163 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 FOXQ1Q9C009 403 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 REXO4Q9GZR2 422 aaKnown RBP19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 LTB4R2Q9NPC1 389 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 MAPRE3Q9UPY8 281 aa19.5■□□□□ 0.71
PACSIN3-211ENST00000539589 CLPTM1O96005 669 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 CDKN2CP42773 168 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 TAP2Q03519 686 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 UGT8Q16880 541 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 TRIM69Q86WT6 500 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 OR7A2PQ8NGA2 310 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 OR8J2Q8NGG1 315 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 CHTF18Q8WVB6 975 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 POP5Q969H6 163 aaKnown RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 C1QTNF7Q9BXJ2 289 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 MRPS26Q9BYN8 205 aaKnown RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 ZDHHC5Q9C0B5 715 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 EHD1Q9H4M9 534 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 POLMQ9NP87 494 aaPredicted RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 FAM120CQ9NX05 1096 aaKnown RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 ETHE1O95571 254 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 C1GALT1C1LP0DN25 315 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 DGKEP52429 567 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 ABHD18Q0P651 414 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 SFSWAPQ12872 951 aaKnown RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 PGBD3Q8N328 593 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 C1orf52Q8N6N3 182 aaKnown RBP19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 NCLNQ969V3 563 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 PANX1Q96RD7 426 aa19.49■□□□□ 0.71
PACSIN3-211ENST00000539589 PRPF18Q99633 342 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms