RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 COL6A3P12111 3177 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 SERPINB7O75635 380 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 KRT6AP02538 564 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 KRT6BP04259 564 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 FCGR1AP12314 374 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 DCKP27707 260 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 TTKP33981 857 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 KRT6CP48668 564 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 UFM1P61960 85 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 RAB39AQ14964 217 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 CYP51A1Q16850 503 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 GGTA1PQ4G0N0 100 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 XKR6Q5GH73 641 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPR107Q5VW38 600 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 ZNF687Q8N1G0 1237 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 SELENOMQ8WWX9 145 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 THAP11Q96EK4 314 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 IL17FQ96PD4 163 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 TRIM8Q9BZR9 551 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 PAIP1Q9H074 479 aaKnown RBP16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 ELOVL6Q9H5J4 265 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 POLR1BQ9H9Y6 1135 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 LMAN1LQ9HAT1 526 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 KCNK6Q9Y257 313 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 PCDHA9Q9Y5H5 950 aa16.48■□□□□ 0.23
PCDHB17P-201ENST00000539533 CACNB4O00305 520 aaPredicted RBP16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 RGS14O43566 566 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC2A4P14672 509 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 CAPGP40121 348 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 CLCNKAP51800 687 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 TBPL1P62380 186 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 FOXM1Q08050 763 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 UNC5DQ6UXZ4 953 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 KLHDC8AQ8IYD2 350 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 ASB12Q8WXK4 309 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 BRINP2Q9C0B6 783 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 FGF22Q9HCT0 170 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 SELENONQ9NZV5 590 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC28A1O00337 649 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 EMX2Q04743 252 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 DOC2AQ14183 400 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 GAS6Q14393 721 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SPATS1Q496A3 300 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 PYCR3Q53H96 274 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 COQ5Q5HYK3 327 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SUSD1Q6UWL2 747 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 RNF165Q6ZSG1 346 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 TRIM69Q86WT6 500 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 DHRSXQ8N5I4 330 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 C2orf73Q8N5S3 287 aaPredicted RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 BMFQ96LC9 184 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 ACPTQ9BZG2 426 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 POLMQ9NP87 494 aaPredicted RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLC52A3Q9NQ40 469 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SMPD3Q9NY59 655 aaPredicted RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SNX6Q9UNH7 406 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 A0A1W2PPW3 197 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 LRRC72A6NJI9 287 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 G6PDP11413 515 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 GNPDA1P46926 289 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 RPL38P63173 70 aaKnown RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 TAP2Q03519 686 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 IMPG1Q17R60 797 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 CYBRD1Q53TN4 286 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 TPRG1LQ5T0D9 272 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 BLOC1S3Q6QNY0 202 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 TMEM26Q6ZUK4 368 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 GALNT13Q8IUC8 556 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 LRRC56Q8IYG6 542 aaPredicted RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 NEIL2Q969S2 332 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 TMEM125Q96AQ2 219 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 PPP3R2Q96LZ3 170 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SLX1AQ9BQ83 275 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 SH2B3Q9UQQ2 575 aa16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 POLR3HQ9Y535 204 aaPredicted RBP16.46■□□□□ 0.23
PCDHB17P-201ENST00000539533 FUOMA2VDF0 154 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 IFRD1O00458 451 aaPredicted RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 OCM2P0CE71 109 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 OCMP0CE72 109 aaPredicted RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 JUPP14923 745 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 NPPBP16860 134 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZFP36L2P47974 494 aaKnown RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 GSK3BP49841 420 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 DGKEP52429 567 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 SPIDRQ14159 915 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 LIPJQ5W064 366 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 CAPN13Q6MZZ7 669 aaPredicted RBP16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 KCTD8Q6ZWB6 473 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 IFNEQ86WN2 208 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 TBC1D15Q8TC07 691 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 NUDT8Q8WV74 236 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 BORCS5Q969J3 196 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 RAD51AP1Q96B01 352 aa16.45■□□□□ 0.22
PCDHB17P-201ENST00000539533 MUC13Q9H3R2 512 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms