RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CASTOR2A6NHX0 329 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 DOK2O60496 412 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 ZBED4O75132 1171 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 BAIAP3O94812 1187 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 VENTXO95231 258 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 FAM200BP0CF97 657 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 PAX3P23760 479 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 ELK3P41970 407 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 MC1RQ01726 317 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 C4orf50Q6ZRC1 276 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 PRR22Q8IZ63 422 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 TCEANCQ8N8B7 351 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 OR10S1Q8NGN2 331 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 ATL1Q8WXF7 558 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 RADILQ96JH8 1075 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 KLHL5Q96PQ7 755 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 APOL2Q9BQE5 337 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 LRRCC1Q9C099 1032 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 IL1RAPQ9NPH3 570 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 HACD3Q9P035 362 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 CRNNQ9UBG3 495 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-209ENST00000539197 ITIH6Q6UXX5 1313 aa3.6□□□□□ -1.83
CCDC7-209ENST00000539197 A0A1W2PPM1 405 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 CDX4O14627 284 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-209ENST00000539197 MTRF1O75570 445 aaKnown RBP3.59□□□□□ -1.83
CCDC7-209ENST00000539197 ANPEPP15144 967 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 GSK3BP49841 420 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 CCR3P51677 355 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 ACY1Q03154 408 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 CUL3Q13618 768 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 IGFL3Q6UXB1 125 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 CFAP61Q8NHU2 1237 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 RPS6KL1Q9Y6S9 549 aa3.59□□□□□ -1.83
CCDC7-209ENST00000539197 ZNF749O43361 778 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 CYTIPO60759 359 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 RAB40ALP0C0E4 278 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 PFKFB1P16118 471 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 CETN2P41208 172 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 STAT2P52630 851 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 RIDAP52758 137 aaKnown RBP3.58□□□□□ -1.84
CCDC7-209ENST00000539197 OR1D5P58170 312 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 CREB5Q02930 508 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 RASGEF1BQ0VAM2 473 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 SNAPC1Q16533 368 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 TMEM266Q2M3C6 531 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 FGD3Q5JSP0 725 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 ATP1A1-AS1Q5TC04 95 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 SERINC5Q86VE9 423 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 RCOR2Q8IZ40 523 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 AVL9Q8NBF6 648 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 ZNF622Q969S3 477 aaKnown RBP eCLIP3.58□□□□□ -1.84
CCDC7-209ENST00000539197 SKA1Q96BD8 255 aa3.58□□□□□ -1.84
CCDC7-209ENST00000539197 F8VVB4 439 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 F8VWA3 439 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 K7ENM7 598 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 ACSL3O95573 720 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 ADORA3P0DMS8 318 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 NEDD4P46934 1319 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 IGLV3-21P80748 117 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-209ENST00000539197 CBWD6Q4V339 395 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 CBWD3Q5JTY5 395 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 UTF1Q5T230 341 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 CTR9Q6PD62 1173 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 POGZQ7Z3K3 1410 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 CERS3Q8IU89 383 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 HSCBQ8IWL3 235 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 SLC22A15Q8IZD6 547 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 MOB3AQ96BX8 217 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 PHYHIPLQ96FC7 376 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 NEDD4LQ96PU5 975 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 TMX4Q9H1E5 349 aaPredicted RBP3.57□□□□□ -1.84
CCDC7-209ENST00000539197 TBC1D13Q9NVG8 400 aa3.57□□□□□ -1.84
CCDC7-209ENST00000539197 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 TXNL1O43396 289 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 ENTPD3O75355 529 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 MT-ND1P03886 318 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 RPLP0P05388 317 aaKnown RBP3.56□□□□□ -1.84
CCDC7-209ENST00000539197 GPR183P32249 361 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 HIPK1Q86Z02 1210 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 BTBD9Q96Q07 612 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 AUP1Q9Y679 476 aa3.56□□□□□ -1.84
CCDC7-209ENST00000539197 A0A1B0GTH9 108 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 TRIM77I1YAP6 450 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 SNX3O60493 162 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 TSPAN9O75954 239 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 LINGO3P0C6S8 592 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 CYP11B2P19099 503 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 LHX1P48742 406 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 RPL34P49207 117 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 CLNS1AP54105 237 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 GEMIN4P57678 1058 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 DUSP5Q16690 384 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 FAM106AQ4KMX7 169 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 VASH2Q86V25 355 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms