RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CDK4P11802 303 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 HGFP14210 728 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 ST6GAL1P15907 406 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 NCF2P19878 526 aaPredicted RBP16.53■□□□□ 0.24
CLN6-202ENST00000538696 CDH3P22223 829 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CMPK1P30085 196 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 ABATP80404 500 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 PRDX1Q06830 199 aaKnown RBP16.53■□□□□ 0.24
CLN6-202ENST00000538696 CDC16Q13042 620 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 SPDYAQ5MJ70 313 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 SNAP47Q5SQN1 464 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CACHD1Q5VU97 1274 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 RBM44Q6ZP01 1051 aaKnown RBP16.53■□□□□ 0.24
CLN6-202ENST00000538696 METTL6Q8TCB7 284 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 MARK4Q96L34 752 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CATSPER2Q96P56 530 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CCDC106Q9BWC9 280 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 KLHL25Q9H0H3 589 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 ZNF385DQ9H6B1 395 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 MRPS30Q9NP92 439 aaKnown RBP16.53■□□□□ 0.24
CLN6-202ENST00000538696 C1GALT1Q9NS00 363 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 SEMA5BQ9P283 1151 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 GIMAP2Q9UG22 337 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 SLC12A4Q9UP95 1085 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 DYRK1BQ9Y463 629 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 KCNE1BA0A087WTH5 132 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 IGHV5-51A0A0C4DH38 117 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 ATP6AP2A0A1C7CYW4 349 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 CAPN14A8MX76 684 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 E7EQ34 232 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 FFAR3O14843 346 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 GPR42O15529 346 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 NRP2O60462 931 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 ATP6AP2O75787 350 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 FKBP9O95302 570 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 CHEK2O96017 543 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 CDH1P12830 882 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 MAGP20916 626 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 HMOX2P30519 316 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 GRIA3P42263 894 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 NCALDP61601 193 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 ZFP36L1Q07352 338 aaKnown RBP16.52■□□□□ 0.24
CLN6-202ENST00000538696 XKR7Q5GH72 579 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 HES3Q5TGS1 186 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 METTL21CQ5VZV1 264 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 FCRL6Q6DN72 434 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 C17orf64Q86WR6 236 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 SLC5A11Q8WWX8 675 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 NEIL2Q969S2 332 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 TRAPPC9Q96Q05 1148 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 ACTR8Q9H981 624 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 GPRC5BQ9NZH0 403 aa16.52■□□□□ 0.24
CLN6-202ENST00000538696 SLC9B1P1A6NJY1 282 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 A8MU76 341 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 RASSF9O75901 435 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 CLDN9O95484 217 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 MT-CO3P00414 261 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 ANKRD34CP0C6C1 535 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 T-ENOLP0DO92 83 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 SCTRP47872 440 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 KRT72Q14CN4 511 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 ZIC1Q15915 447 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 GGTA1PQ4G0N0 100 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 CATSPEREQ5SY80 951 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 ZNF425Q6IV72 752 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 LARP4Q71RC2 724 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLN6-202ENST00000538696 ARHGAP22Q7Z5H3 698 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 TMPRSS11BQ86T26 416 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 MYLK4Q86YV6 388 aaPredicted RBP16.51■□□□□ 0.23
CLN6-202ENST00000538696 CARFQ8N187 725 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 C19orf47Q8N9M1 422 aaKnown RBP16.51■□□□□ 0.23
CLN6-202ENST00000538696 OR2T11Q8NH01 316 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 CEP70Q8NHQ1 597 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 DPH7Q9BTV6 452 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 SLC29A3Q9BZD2 475 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 ZNF768Q9H5H4 540 aaKnown RBP16.51■□□□□ 0.23
CLN6-202ENST00000538696 AKTIPQ9H8T0 292 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 KLK4Q9Y5K2 254 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 KCNE2Q9Y6J6 123 aa16.51■□□□□ 0.23
CLN6-202ENST00000538696 MANBAO00462 879 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 TOX3O15405 576 aaPredicted RBP16.5■□□□□ 0.23
CLN6-202ENST00000538696 PRAMEF10O60809 474 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 CCKBRP32239 447 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 SEPHS1P49903 392 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 CHIT1Q13231 466 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 TRA2AQ13595 282 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLN6-202ENST00000538696 PHF19Q5T6S3 580 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 FIGLAQ6QHK4 219 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 SLCO4C1Q6ZQN7 724 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 CHSY3Q70JA7 882 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 PAQR7Q86WK9 346 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 L3MBTL4Q8NA19 623 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 RCBTB1Q8NDN9 531 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 ABHD11Q8NFV4 315 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 KLHL6Q8WZ60 621 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 PTCD3Q96EY7 689 aaKnown RBP16.5■□□□□ 0.23
CLN6-202ENST00000538696 SLC41A2Q96JW4 573 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 TMEM74Q96NL1 305 aa16.5■□□□□ 0.23
CLN6-202ENST00000538696 HBEGFQ99075 208 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms