RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TSPAN6O43657 245 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 RGS10O43665 173 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PCDH7O60245 1069 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 CXCL10P02778 98 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 FUT4P22083 530 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PBLDP30039 288 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 C21orf33P30042 268 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 RRM2P31350 389 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 KCNJ10P78508 379 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 NPRL3Q12980 569 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TSTA3Q13630 321 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SYT16Q17RD7 645 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PLEKHS1Q5SXH7 462 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TSEN54Q7Z6J9 526 aaKnown RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TRIM74Q86UV6 250 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TRIM73Q86UV7 250 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TMC8Q8IU68 726 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 ENTHD1Q8IYW4 607 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 FAM9CQ8IZT9 166 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 ELMOD1Q8N336 334 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SYNPOQ8N3V7 929 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 OR8J2Q8NGG1 315 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 DNASE1L2Q92874 299 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 FCRL1Q96LA6 429 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF300Q96RE9 604 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 APOL4Q9BPW4 351 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 RIOK2Q9BVS4 552 aaKnown RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SPATA6Q9NWH7 488 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 HCFC1R1Q9NWW0 138 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TESMINQ9Y4I5 508 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PCDHB11Q9Y5F2 797 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SAP18O00422 153 aaKnown RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 GCM2O75603 506 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 POP4O95707 220 aaKnown RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SLC16A8O95907 504 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 ANXA4P09525 319 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 BMP4P12644 408 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PORP16435 677 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PDHA2P29803 388 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 OR1E2P47887 323 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 AP1S2P56377 157 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 DEFB103AP81534 67 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 KCNC4Q03721 635 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 CBX3Q13185 183 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 CAMK2GQ13555 558 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 DNASE1L3Q13609 305 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 PRSS36Q5K4E3 855 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 COX20Q5RI15 118 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 MPP7Q5T2T1 576 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SYT6Q5T7P8 510 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 FAM124AQ86V42 546 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 OR4K1Q8NGD4 311 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 OR2A12Q8NGT7 310 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 VWCEQ96DN2 955 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 BTBD2Q9BX70 525 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 FAM83DQ9H4H8 585 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 RUBCNLQ9H714 662 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 STOX2Q9P2F5 926 aaPredicted RBP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPNE8-203ENST00000538596 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
CPNE8-203ENST00000538596 EIF3FO00303 357 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 SCAMP2O15127 329 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ADAM23O75077 832 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CDH3P22223 829 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CCR2P41597 374 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RXRGP48443 463 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ITGA1P56199 1179 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF385BQ569K4 471 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CPTPQ5TA50 214 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 LIPJQ5W064 366 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 TTC23LQ6PF05 361 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 GDPD4Q6W3E5 623 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 TSPYL5Q86VY4 417 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF366Q8N895 744 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CYB5D2Q8WUJ1 264 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ASZ1Q8WWH4 475 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 PROX1Q92786 737 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 ASPSCR1Q9BZE9 553 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 CHST8Q9H2A9 424 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 HMG20AQ9NP66 347 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 POLE4Q9NR33 117 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 RLIMQ9NVW2 624 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 FAM120CQ9NX05 1096 aaKnown RBP11.53□□□□□ -0.56
CPNE8-203ENST00000538596 B3GNT3Q9Y2A9 372 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 DENND4CQ5VZ89 1909 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 C1orf226A1L170 272 aa11.53□□□□□ -0.56
CPNE8-203ENST00000538596 KRBA1A5PL33 1030 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms