RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ENKD1Q9H0I2 346 aa13.21□□□□□ -0.29
SMARCA4-206ENST00000538456 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
SMARCA4-206ENST00000538456 AMFRQ9UKV5 643 aa13.21□□□□□ -0.29
SMARCA4-206ENST00000538456 HCFC1P51610 2035 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 E9PLN8 166 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 GOLGA8TH3BQL2 631 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 SMAPO00193 183 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 TSPAN12O95859 305 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC16A8O95907 504 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 FTCDO95954 541 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 ETS1P14921 441 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF24P17028 368 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 IL1RNP18510 177 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 NMBRP28336 390 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 GBX1Q14549 363 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 EXT1Q16394 746 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 PCID2Q5JVF3 399 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 THEMIS2Q5TEJ8 643 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 MPP5Q8N3R9 675 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC5A8Q8N695 610 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 OR51Q1Q8NH59 317 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 TREX1Q9NSU2 369 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 CRYL1Q9Y2S2 319 aa13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 EPN1Q9Y6I3 576 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-206ENST00000538456 NIPBLQ6KC79 2804 aaeCLIP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 H0YIG0 161 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 SGK494L7N484 410 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 PRRG2O14669 202 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ADAM10O14672 748 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 LIASO43766 372 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 PSIP1O75475 530 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CDC123O75794 336 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 NEURL1O76050 574 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 NADKO95544 446 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CATP04040 527 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 SP1P08047 785 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CD1EP15812 388 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CHRM3P20309 590 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ATP5DP30049 168 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 AGTR2P50052 363 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 PTK6Q13882 451 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 KCNJ11Q14654 390 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ABRAXAS2Q15018 415 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CES3Q6UWW8 571 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 FGD2Q7Z6J4 655 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 CPSF7Q8N684 471 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ZCCHC10Q8TBK6 192 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 M1APQ8TC57 530 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 MCOLN3Q8TDD5 553 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 PHF10Q8WUB8 498 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF480Q8WV37 535 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 LPGAT1Q92604 370 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 MMP25Q9NPA2 562 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 COQ3Q9NZJ6 369 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 LRFN1Q9P244 771 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF839A8K0R7 811 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 E7ENX8 843 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 H7BY64 318 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 RDH16O75452 317 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC25A12O75746 678 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 VAPBO95292 243 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 CYC1P08574 325 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ARNTP27540 789 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 PTGER1P34995 402 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 HSD17B2P37059 387 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ART1P52961 327 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ABATP80404 500 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 TAP2Q03519 686 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 SNX1Q13596 522 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 OASLQ15646 514 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 NSDHLQ15738 373 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF468Q5VIY5 522 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 MRNIPQ6NTE8 343 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms