RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SPTBP11277 2137 aa11.24□□□□□ -0.61
SPARC-207ENST00000537849 CROCCQ5TZA2 2017 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 GSAPA4D1B5 854 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 RHPN2P1A8MT19 583 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 HAT1O14929 419 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 ANKRD28O15084 1053 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 OR1F1O43749 312 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 PCDHGA12O60330 932 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 PRAMEF10O60809 474 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 KLHL18O94889 574 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 CER1O95813 267 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 TGFB1P01137 390 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 GLB1P16278 677 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 PTX3P26022 381 aaPredicted RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 PIK3R1P27986 724 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 BCL6P41182 706 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 GPR3P46089 330 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 EPHA4P54764 986 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 OR1D5P58170 312 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 RAE1P78406 368 aaKnown RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 IRX1P78414 480 aaPredicted RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 SQLEQ14534 574 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 DEPDC1Q5TB30 811 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 ZCCHC8Q6NZY4 707 aaKnown RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 DBX2Q6ZNG2 339 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPARC-207ENST00000537849 FNDC5Q8NAU1 212 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 MFSD9Q8NBP5 474 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 DUSP23Q9BVJ7 150 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 MS4A8Q9BY19 250 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 BRINP2Q9C0B6 783 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 AICDAQ9GZX7 198 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 RAB33BQ9H082 229 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SDR39U1Q9NRG7 319 aaPredicted RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 ASIC5Q9NY37 505 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 ANKMY1Q9P2S6 941 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 EPHA6Q9UF33 1036 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 POMT2Q9UKY4 750 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SLC12A4Q9UP95 1085 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 AP1M2Q9Y6Q5 423 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 CAPN7Q9Y6W3 813 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 SCN3AQ9NY46 2000 aa11.23□□□□□ -0.61
SPARC-207ENST00000537849 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
SPARC-207ENST00000537849 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 A0A0J9YY10 115 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 ANKDD1BA6NHY2 528 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 CTSVO60911 334 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 SH3BGRLO75368 114 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 CLEC3AO75596 197 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 CBX6O95503 412 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 G6PDP11413 515 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 BCKDHAP12694 445 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 COX4I1P13073 169 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 IDO1P14902 403 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PVRP15151 417 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 ENGP17813 658 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 MAGP20916 626 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PRDX6P30041 224 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 SERPINB1P30740 379 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 GRK3P35626 688 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 NUP214P35658 2090 aaPredicted RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 AHRP35869 848 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 ZFP36L2P47974 494 aaKnown RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 CCT8P50990 548 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 HNRNPH2P55795 449 aaKnown RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 UFM1P61960 85 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 CFHR1Q03591 330 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 HYAL2Q12891 473 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 CUL3Q13618 768 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PDCD4Q53EL6 469 aaKnown RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 KLHL35Q6PF15 583 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PAOXQ6QHF9 649 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 ADCK2Q7Z695 626 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 EID2Q8N6I1 236 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 BAHD1Q8TBE0 780 aaPredicted RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 SLC7A6OSQ96CW6 309 aaPredicted RBP11.22□□□□□ -0.61
SPARC-207ENST00000537849 TM4SF19Q96DZ7 209 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 APOLD1Q96LR9 279 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 TRAPPC9Q96Q05 1148 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 F2RL3Q96RI0 385 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 SERPINI1Q99574 410 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 LRFN3Q9BTN0 628 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 OR51B5Q9H339 312 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 SEMA6CQ9H3T2 930 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 SLC52A3Q9NQ40 469 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 TAGLN3Q9UI15 199 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 GMEB2Q9UKD1 530 aa11.22□□□□□ -0.61
SPARC-207ENST00000537849 RAB23Q9ULC3 237 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms