RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
CLSTN3-207ENST00000537408 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
CLSTN3-207ENST00000537408 MUTYHQ9UIF7 546 aa10.56□□□□□ -0.72
CLSTN3-207ENST00000537408 SERPINA1P01009 418 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 NPPAP01160 153 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ACSM4P0C7M7 580 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 EPHB3P54753 998 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 MAD2L1BPQ15013 274 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 OR9Q1Q8NGQ5 310 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 WDR36Q8NI36 951 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 SLC5A11Q8WWX8 675 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PDLIM5Q96HC4 596 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 COL21A1Q96P44 957 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 QRFPRQ96P65 431 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 GAL3ST1Q99999 423 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 SHARPINQ9H0F6 387 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 KLK4Q9Y5K2 254 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 SLC43A1O75387 559 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 GJB5O95377 273 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ITGB1P05556 798 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 DCTP40126 519 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 RAB13P51153 203 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 TMEM240Q5SV17 173 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PYHIN1Q6K0P9 492 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 CAPN13Q6MZZ7 669 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 RXFP2Q8WXD0 754 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PIP5K1AQ99755 562 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 TCF25Q9BQ70 676 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 GPR63Q9BZJ6 419 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 CDT1Q9H211 546 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 IL1RAPQ9NPH3 570 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 NCKAP1Q9Y2A7 1128 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 OAS3Q9Y6K5 1087 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 LINC00587B1AMM8 73 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ANKRD28O15084 1053 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 HCN1O60741 890 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 HGFP14210 728 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ARSAP15289 507 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 KIR2DL3P43628 341 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 STARP49675 285 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 EMX2Q04743 252 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ACOT1Q86TX2 421 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 TSPYL5Q86VY4 417 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 GHDCQ8N2G8 530 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 EXOC2Q96KP1 924 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 KLHL15Q96M94 604 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 EEDO75530 441 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 RECQL4O94761 1208 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ANXA3P12429 323 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ARSBP15848 533 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 WDR5P61964 334 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 RPP38P78345 283 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ZMAT1Q5H9K5 638 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 TOR1AIP1Q5JTV8 583 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 CEP76Q8TAP6 659 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PCNPQ8WW12 178 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 OTULINQ96BN8 352 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 ERMAPQ96PL5 475 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PEBP4Q96S96 227 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 SDHAF3Q9NRP4 125 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 BTRCQ9Y297 605 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PHIPQ8WWQ0 1821 aa10.55□□□□□ -0.72
CLSTN3-207ENST00000537408 PRAMEF33A0A0G2JMD5 474 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 FAM95CA0A1B0GW59 222 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 MYO1GB0I1T2 1018 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 M0R233 179 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 PRAMEF10O60809 474 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 CNPP09543 421 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 SBK3P0C264 359 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 CSKP41240 450 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 EPHA5P54756 1037 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 TUSC3Q13454 348 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 GOLGA7BQ2TAP0 167 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 ATP6AP1LQ52LC2 224 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 ZNF425Q6IV72 752 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 KDELC1Q6UW63 502 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 CYP4Z2PQ8N1L4 340 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 OR52K1Q8NGK4 314 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 MRPS31Q92665 395 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 FCRL3Q96P31 734 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 LHX5Q9H2C1 402 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 RC3H2Q9HBD1 1191 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 GPRC5BQ9NZH0 403 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 CLCA3PQ9Y6N3 262 aa10.54□□□□□ -0.72
CLSTN3-207ENST00000537408 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms