RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 ARF3P61204 181 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 MRPS25P82663 173 aaKnown RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 CDKL1Q00532 357 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 CKAP4Q07065 602 aaKnown RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 C2orf54Q08AI8 447 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 AIMP2Q13155 320 aaKnown RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 FAM53BQ14153 422 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 NKG7Q16617 165 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 PHKG1Q16816 387 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 MUM1Q2TAK8 710 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 SBSNQ6UWP8 590 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 ZDHHC24Q6UX98 284 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 NKAPQ8N5F7 415 aaKnown RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 OR4K1Q8NGD4 311 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 OR56A3Q8NH54 315 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 FBXL8Q96CD0 374 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 LINGO1Q96FE5 620 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 C10orf90Q96M02 699 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 SPSB2Q99619 263 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 DPH5Q9H2P9 285 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 AGPAT4Q9NRZ5 378 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
PRKDC-207ENST00000536483 FBXL4Q9UKA2 621 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 A0A1W2PQ72 361 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TCRBV9S1A1TA0A576 114 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 MED26O95402 600 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 HIST1H2AGP0C0S8 130 aaPredicted RBP11.83□□□□□ -0.52
PRKDC-207ENST00000536483 HIST1H2ADP20671 130 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 MMP11P24347 488 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TAS2R39P59534 338 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 GPX6P59796 221 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TBPL1P62380 186 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 POU4F1Q01851 419 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 PRAMEF13Q5VWM6 474 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 C3orf62Q6ZUJ4 267 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 RELL1Q8IUW5 271 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 ST6GALNAC3Q8NDV1 305 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 FBXO25Q8TCJ0 367 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 ATL1Q8WXF7 558 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TM4SF19Q96DZ7 209 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 HIST1H2AHQ96KK5 128 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 CPNE1Q99829 537 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 HIST1H2AJQ99878 128 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 WDR77Q9BQA1 342 aaPredicted RBP11.83□□□□□ -0.52
PRKDC-207ENST00000536483 HAUS8Q9BT25 410 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 H2AFJQ9BTM1 129 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TRIM54Q9BYV2 358 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 ZNF304Q9HCX3 659 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 SAYSD1Q9NPB0 183 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 CDC14AQ9UNH5 594 aa11.83□□□□□ -0.52
PRKDC-207ENST00000536483 DIDO1Q9BTC0 2240 aaKnown RBP11.83□□□□□ -0.52
PRKDC-207ENST00000536483 FAM95CA0A1B0GW59 222 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CXorf49A8MYA2 514 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 H7BY64 318 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SOCS6O14544 535 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 PCDH17O14917 1159 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 LRRTM2O43300 516 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SYF2O95926 243 aaKnown RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SSTR1P30872 391 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SLC26A3P40879 764 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 PLTPP55058 493 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 RPS15AP62244 130 aaKnown RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CSNK1G2P78368 415 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 NAE1Q13564 534 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 DSG2Q14126 1118 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 TRADDQ15628 312 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 ZKSCAN8Q15776 578 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CDKL4Q5MAI5 379 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 AGAP7PQ5VUJ5 663 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CAPN13Q6MZZ7 669 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 IGFL2Q6UWQ7 119 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SHISA6Q6ZSJ9 500 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 VN1R4Q7Z5H5 301 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 TICAM1Q8IUC6 712 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 PARP9Q8IXQ6 854 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 KLHDC8AQ8IYD2 350 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CSNK1A1LQ8N752 337 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 DNAJB14Q8TBM8 379 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 PPP4R1Q8TF05 950 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 CDKL2Q92772 493 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 VPS39Q96JC1 886 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 PRAP1Q96NZ9 151 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 AGAP4Q96P64 663 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 GPR22Q99680 433 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 SOX17Q9H6I2 414 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 ZDHHC18Q9NUE0 388 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 IKZF3Q9UKT9 509 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 RUVBL1Q9Y265 456 aaKnown RBP11.82□□□□□ -0.52
PRKDC-207ENST00000536483 HS3ST3B1Q9Y662 390 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms