RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CORO1CQ9ULV4 474 aaPredicted RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 NTNG1Q9Y2I2 539 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 P2RX6O15547 441 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 FOXS1O43638 330 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 NSA2O95478 260 aaKnown RBP12.44□□□□□ -0.42
RTN3-207ENST00000536011 SLC35G6P0C7Q6 338 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 SOX11P35716 441 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 FAAH2Q6GMR7 532 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 GALNT7Q86SF2 657 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 PLD3Q8IV08 490 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 ARHGEF39Q8N4T4 335 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 MAGEB10Q96LZ2 347 aaPredicted RBP12.44□□□□□ -0.42
RTN3-207ENST00000536011 HAUS8Q9BT25 410 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 ANKHQ9HCJ1 492 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 OLAHQ9NV23 265 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 MDC1Q14676 2089 aaKnown RBP12.44□□□□□ -0.42
RTN3-207ENST00000536011 POLEQ07864 2286 aa12.44□□□□□ -0.42
RTN3-207ENST00000536011 DNALI1O14645 258 aaPredicted RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 FFAR3O14843 346 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 GPR42O15529 346 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 KLHL18O94889 574 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 RNF224P0DH78 156 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 TCP1P17987 556 aaKnown RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 AGTR2P50052 363 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 TNFSF10P50591 281 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 AP1S2P56377 157 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 IL2P60568 153 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 MINDY4Q4G0A6 757 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 ABHD17BQ5VST6 288 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 CAPN13Q6MZZ7 669 aaPredicted RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 NIPAL1Q6NVV3 410 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 AGTRAPQ6RW13 159 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 SYDE1Q6ZW31 735 aaPredicted RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 CNTN4Q8IWV2 1026 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 AGGF1Q8N302 714 aaeCLIP12.43□□□□□ -0.42
RTN3-207ENST00000536011 SLC35F6Q8N357 371 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 OR9A4Q8NGU2 314 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 ATL1Q8WXF7 558 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 HAS2Q92819 552 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 LINGO1Q96FE5 620 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 RUNDC3BQ96NL0 473 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 NDNQ99608 321 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 SLX1AQ9BQ83 275 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■□□□□ 8.9
RTN3-207ENST00000536011 PPANQ9NQ55 473 aaKnown RBP12.43□□□□□ -0.42
RTN3-207ENST00000536011 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
RTN3-207ENST00000536011 E2F3O00716 465 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 IL10P22301 178 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 XCR1P46094 333 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 CCR8P51685 355 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 CSNK1G2P78368 415 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
RTN3-207ENST00000536011 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
RTN3-207ENST00000536011 NAE1Q13564 534 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 MORF4L2Q15014 288 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
RTN3-207ENST00000536011 LCTLQ6UWM7 567 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 VN1R4Q7Z5H5 301 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 ASPGQ86U10 573 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 OR51Q1Q8NH59 317 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 PSMF1Q92530 271 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 CERS2Q96G23 380 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 SGPP1Q9BX95 441 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 VN1R1Q9GZP7 353 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 SYNPO2LQ9H987 977 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 ABI3Q9P2A4 366 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 ADAMTS6Q9UKP5 1117 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 OSGIN2Q9Y236 505 aa12.42□□□□□ -0.42
RTN3-207ENST00000536011 A0A1B0GUH1 482 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 CRYABP02511 175 aaKnown RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 ENO2P09104 434 aaPredicted RBP12.41□□□□□ -0.42
RTN3-207ENST00000536011 CDH1P12830 882 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 IL1RNP18510 177 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 BCL6P41182 706 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 CDKN2DP55273 166 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 ZNF33BQ06732 778 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 HERC3Q15034 1050 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 EXT1Q16394 746 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 SYT16Q17RD7 645 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 BBS9Q3SYG4 887 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 DUPD1Q68J44 220 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 PLAG1Q6DJT9 500 aa12.41□□□□□ -0.42
RTN3-207ENST00000536011 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms