RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 HGH1Q9BTY7 390 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 NACAP1Q9BZK3 213 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SPATC1LQ9H0A9 340 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TFB2MQ9H5Q4 396 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 KAT14Q9H8E8 782 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SLC38A10Q9HBR0 1119 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SLC35C2Q9NQQ7 365 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 PDRG1Q9NUG6 133 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SEPT11Q9NVA2 429 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 SETD4Q9NVD3 440 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 HOXC10Q9NYD6 342 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 KLHL9Q9P2J3 617 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 WDR35Q9P2L0 1181 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SUN2Q9UH99 717 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 BLOC1S6Q9UL45 172 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 FAF1Q9UNN5 650 aaPredicted RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 GAB2Q9UQC2 676 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 R3HDM2Q9Y2K5 976 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.23□□□□□ -1.893e-19■□□□□ 9.5
USP48-215ENST00000534705 PFASO15067 1338 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PHLPP2Q6ZVD8 1323 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PDCD11Q14690 1871 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 CDH23Q9H251 3354 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 COL6A3P12111 3177 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 ANTXRLA6NF34 631 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 C5orf60A6NFR6 353 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 MYO1GB0I1T2 1018 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 E7EWF7 191 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 H3BQF6 201 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CHUKO15111 745 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PCDH7O60245 1069 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 RANBP6O60518 1105 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 ZNF217O75362 1048 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GPC4O75487 556 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 WISP2O76076 250 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 OR2C1O95371 312 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 TGDSO95455 350 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CAVIN2O95810 425 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PAK4O96013 591 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 SELLP14151 372 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 DESP17661 470 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 ANXA7P20073 488 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 NR1D1P20393 614 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 HRH2P25021 359 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CCND3P30281 292 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 PPARGP37231 505 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 EIF2DP41214 584 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 CAMPP49913 170 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CCNHP51946 323 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 CRIP2P52943 208 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 TPD52P55327 224 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 BPIFB3P59826 476 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 SNAP25P60880 206 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CCNA1P78396 465 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 NECTIN1Q15223 517 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PLEKHS1Q5SXH7 462 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GKAP1Q5VSY0 366 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 TTC19Q6DKK2 380 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 SLC27A1Q6PCB7 646 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 TRIM65Q6PJ69 517 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CNSTQ6PJW8 725 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PLXDC2Q6UX71 529 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 FAM47EQ6ZV65 393 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 BTN2A1Q7KYR7 527 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 LONP2Q86WA8 852 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 LRRC8AQ8IWT6 810 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 MCEMP1Q8IX19 187 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 WDSUB1Q8N9V3 476 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 POMGNT2Q8NAT1 580 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 KCTD6Q8NC69 237 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 HJURPQ8NCD3 748 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 DBF4BQ8NFT6 615 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 OR8K1Q8NGG5 319 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GOT1L1Q8NHS2 421 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 U2AF1L4Q8WU68 220 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 SCFD2Q8WU76 684 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 ZFAND2BQ8WV99 257 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 TM9SF4Q92544 642 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 ZNF501Q96CX3 271 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 ELMOD3Q96FG2 381 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GFI1Q99684 422 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GPATCH1Q9BRR8 931 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 RBM4Q9BWF3 364 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 TRIM6Q9C030 488 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 CPVLQ9H3G5 476 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PLK3Q9H4B4 646 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 SMARCAD1Q9H4L7 1026 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 RAVER2Q9HCJ3 691 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 TAB2Q9NYJ8 693 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 GGA2Q9UJY4 613 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 CORO1CQ9ULV4 474 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 NENFQ9UMX5 172 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 STX8Q9UNK0 236 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 COL4A4P53420 1690 aaPredicted RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 TDRD15B5MCY1 1934 aaKnown RBP3.22□□□□□ -1.89
USP48-215ENST00000534705 CHD7Q9P2D1 2997 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 EYSQ5T1H1 3165 aa3.22□□□□□ -1.89
USP48-215ENST00000534705 PLXNA4Q9HCM2 1894 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms