RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PRPF4O43172 522 aaKnown RBP eCLIP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 RAD51CO43502 376 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 KLHL41O60662 606 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 IPO13O94829 963 aaKnown RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 ENO2P09104 434 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 BCL6P41182 706 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 TUBB8Q3ZCM7 444 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 PLEKHN1Q494U1 663 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 CRB2Q5IJ48 1285 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 IGFL2Q6UWQ7 119 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 STRA8Q7Z7C7 330 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 ZBED8Q8IZ13 594 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 GALNT11Q8NCW6 608 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 OR4K1Q8NGD4 311 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 FBXL8Q96CD0 374 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 MMABQ96EY8 250 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 SARGQ9BW04 601 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 MKKSQ9NPJ1 570 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 SMYD2Q9NRG4 433 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 ARL15Q9NXU5 204 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 LUZP4Q9P127 313 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 WHRNQ9P202 907 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 NOVA2Q9UNW9 492 aaKnown RBP13.34□□□□□ -0.27
SF3B2-215ENST00000534307 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
SF3B2-215ENST00000534307 FAM95CA0A1B0GW59 222 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 FEZF1A0PJY2 475 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 H0YIG0 161 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 NDC80O14777 642 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 LCMT2O60294 686 aaKnown RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 WISP3O95389 354 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HPP00738 406 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 C1QAP02745 245 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 STATHP02808 62 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 COX6A1P12074 109 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 CDH1P12830 882 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ACPPP15309 386 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HIST1H2ADP20671 130 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ITGA3P26006 1051 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 UQCRFS1P47985 274 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 TAS2R39P59534 338 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ZNF460Q14592 562 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 INPP5JQ15735 1006 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 SYT16Q17RD7 645 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 CAPN13Q6MZZ7 669 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-215ENST00000534307 Q6ZS92 163 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 PRSS41Q7RTY9 318 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ATCAYQ86WG3 371 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 SHISA5Q8N114 240 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 ANKRD7Q92527 254 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 C8orf44Q96CB5 159 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 HAUS8Q9BT25 410 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 RHOJQ9H4E5 214 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 CSMD2Q7Z408 3487 aa13.33□□□□□ -0.28
SF3B2-215ENST00000534307 APCP25054 2843 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 LOC102723996A0A087X1L8 192 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 CXorf49A8MYA2 514 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-215ENST00000534307 EIF3HO15372 352 aaKnown RBP eCLIP13.32□□□□□ -0.28
SF3B2-215ENST00000534307 PIAS1O75925 651 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 NSA2O95478 260 aaKnown RBP13.32□□□□□ -0.28
SF3B2-215ENST00000534307 ANXA5P08758 320 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 RNF224P0DH78 156 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 EMP2P54851 167 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
SF3B2-215ENST00000534307 C2orf54Q08AI8 447 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 NDUFA9Q16795 377 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 ZNF572Q7Z3I7 529 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-215ENST00000534307 CEP97Q8IW35 865 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 MFSD9Q8NBP5 474 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 OR9A4Q8NGU2 314 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 ANKRD49Q8WVL7 239 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 ATL1Q8WXF7 558 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 TM9SF4Q92544 642 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 VPS39Q96JC1 886 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 VPS50Q96JG6 964 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 MACROD1Q9BQ69 325 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 FAM129AQ9BZQ8 928 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 LHPPQ9H008 270 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 ZNF160Q9HCG1 818 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 SLAMF7Q9NQ25 335 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 NSMCE4AQ9NXX6 385 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 CSAG2Q9Y5P2 127 aa13.32□□□□□ -0.28
SF3B2-215ENST00000534307 SETD2Q9BYW2 2564 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 AKAP9Q99996 3911 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 IGHV1-45A0A0A0MS14 117 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms