RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ACSS3Q9H6R3 686 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 ZNF282Q9UDV7 671 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 BAHCC1Q9P281 2608 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 SCN2AQ99250 2005 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 UQCRHLA0A096LP55 91 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 A0A0A6YYC8 382 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 NCF1BA6NI72 391 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 NCF1CA8MVU1 366 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 I3L1I5 382 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 PEX12O00623 359 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 PRPF4O43172 522 aaKnown RBP eCLIP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 FOXS1O43638 330 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 ACSL3O95573 720 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 UQCRHP07919 91 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 SLC35E2BP0CK96 405 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 NCF1P14598 390 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 NR1D1P20393 614 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MMP11P24347 488 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 CRABP2P29373 138 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 GMPRP36959 345 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MEF2AQ02078 507 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 OCA2Q04671 838 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 OR4D1Q15615 310 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 C18orf21Q32NC0 220 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 CATSPEREQ5SY80 951 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 TCTN3Q6NUS6 607 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 ASPGQ86U10 573 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 GPSM1Q86YR5 675 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MFSD9Q8NBP5 474 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 CAMKVQ8NCB2 501 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 STT3BQ8TCJ2 826 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 NACC2Q96BF6 587 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MIEF2Q96C03 454 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MMABQ96EY8 250 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MACROD1Q9BQ69 325 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 SLC25A23Q9BV35 468 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 SARGQ9BW04 601 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 FUT8Q9BYC5 575 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 P4HTMQ9NXG6 502 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 SLC22A14Q9Y267 594 aa14.61□□□□□ -0.07
CPSF1-210ENST00000532935 MRPS2Q9Y399 296 aaKnown RBP14.61□□□□□ -0.07
CPSF1-210ENST00000532935 IGLV3-12A0A075B6K2 115 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TRBC2A0A5B9 178 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 K7EM74 188 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 CEACAM4O75871 244 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 WDR47O94967 919 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 IGHEP01854 428 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 ZGLP1P0C6A0 271 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 PLA2G2AP14555 144 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SLC26A3P40879 764 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SLC6A12P48065 614 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SNRPNP63162 240 aaKnown RBP14.6□□□□□ -0.07
CPSF1-210ENST00000532935 KLC1Q07866 573 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 DLG1Q12959 904 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 BMPR2Q13873 1038 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 UAP1Q16222 522 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-210ENST00000532935 CDKL4Q5MAI5 379 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 MROH9Q5TGP6 573 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TMEM214Q6NUQ4 689 aaKnown RBP14.6□□□□□ -0.07
CPSF1-210ENST00000532935 PRICKLE2Q7Z3G6 844 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TBC1D1Q86TI0 1168 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-210ENST00000532935 KLHDC8AQ8IYD2 350 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TCAIMQ8N3R3 496 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TBC1D19Q8N5T2 526 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 AMER3Q8N944 861 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 ZNF740Q8NDX6 193 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SLC13A3Q8WWT9 602 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 KIAA1191Q96A73 305 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 FER1L6-AS2Q96M78 137 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SPNS1Q9H2V7 528 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 PELI2Q9HAT8 420 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 SEMA3GQ9NS98 782 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 TRPC4Q9UBN4 977 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 PCDHGA9Q9Y5G4 932 aaKnown RBP14.6□□□□□ -0.07
CPSF1-210ENST00000532935 KCNE2Q9Y6J6 123 aa14.6□□□□□ -0.07
CPSF1-210ENST00000532935 HMX2A2RU54 273 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 A6NL46 340 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 AGPSO00116 658 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 FFAR3O14843 346 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 GPR42O15529 346 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 TAPBPO15533 448 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 SUV39H1O43463 412 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 OR1F1O43749 312 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 SLC28A2O43868 658 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 PDGFAP04085 211 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 SLC35G6P0C7Q6 338 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 GDF5P43026 501 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 AVPR1BP47901 424 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 REEP5Q00765 189 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 VWA2Q5GFL6 755 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 DCAF10Q5QP82 559 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 SULT1C3Q6IMI6 304 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 NXPE4Q6UWF7 544 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 ASB18Q6ZVZ8 466 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 TMPRSS11BQ86T26 416 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 IFT20Q8IY31 132 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 PRSS58Q8IYP2 241 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms