RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR2A14Q96R47 310 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 LGMNQ99538 433 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 BARD1Q99728 777 aaKnown RBP3.27□□□□□ -1.89
PTPRK-220ENST00000531466 C16orf70Q9BSU1 422 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 PI4K2AQ9BTU6 479 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 CAPS2Q9BXY5 557 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 SLC7A5P2Q9GIP4 190 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 NACA2Q9H009 215 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 PLK3Q9H4B4 646 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 TRPV4Q9HBA0 871 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 PSD3Q9NYI0 1048 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 MOSPD1Q9UJG1 213 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 LAMP5Q9UJQ1 280 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 HPCAL4Q9UM19 191 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 GPR34Q9UPC5 381 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 PIAS3Q9Y6X2 628 aa3.27□□□□□ -1.89
PTPRK-220ENST00000531466 TMEM129A0AVI4 362 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SRRM4A7MD48 611 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TFECO14948 347 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 P4HA2O15460 535 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 DIAPH2O60879 1101 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SLC4A1P02730 911 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 DNTTP04053 509 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TOP1P11387 765 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TRIM21P19474 475 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 PDHA2P29803 388 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TM4SF1P30408 202 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 S100A5P33763 92 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 CD86P42081 329 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 GTF2A1P52655 376 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 GCNT1Q02742 428 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SCARB2Q14108 478 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 COG2Q14746 738 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 HERC3Q15034 1050 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 MED22Q15528 200 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 BOLA3Q53S33 107 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 PRR30Q53SZ7 412 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 CAVIN4Q5BKX8 364 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 ENOSF1Q7L5Y1 443 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 PPP1R42Q7Z4L9 355 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 COMMD2Q86X83 199 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 ARID3BQ8IVW6 561 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 EFCAB13Q8IY85 973 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TMCO5AQ8N6Q1 288 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 CD177Q8N6Q3 437 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SPERTQ8NA61 448 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 DENND6BQ8NEG7 585 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 OR13C3Q8NGS6 347 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 MOAP1Q96BY2 351 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 VPS39Q96JC1 886 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF597Q96LX8 424 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 JAKMIP1Q96N16 626 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SDF4Q9BRK5 362 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 ITPAQ9BY32 194 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 NT5C3AQ9H0P0 336 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 VCX3BQ9H321 246 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SYNCQ9H7C4 482 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 XAB2Q9HCS7 855 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 EIF2B3Q9NR50 452 aaKnown RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 EXTL2Q9UBQ6 330 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 AMACRQ9UHK6 382 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 TSPAN16Q9UKR8 245 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 SNX8Q9Y5X2 465 aa3.26□□□□□ -1.89
PTPRK-220ENST00000531466 RSF1Q96T23 1441 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-220ENST00000531466 PASKQ96RG2 1323 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 EPHB6O15197 1021 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 STX6O43752 255 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 NMT2O60551 498 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 RNASEH1O60930 286 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 NOL3O60936 208 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 HSPA4LO95757 839 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 KRT6AP02538 564 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 OPN1MWP04001 364 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 KRT6BP04259 564 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 S100A6P06703 90 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 OPN1MW2P0DN77 364 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 OPN1MW3P0DN78 364 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 GZMAP12544 262 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 SCG2P13521 617 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 AKR1B1P15121 316 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 SLC6A6P31641 620 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 PSMB10P40306 273 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 KRT6CP48668 564 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 BLVRAP53004 296 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 MAZP56270 477 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 POLR2FP61218 127 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 AIMP2Q13155 320 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 CUL4AQ13619 759 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 EFTUD2Q15029 972 aaKnown RBP eCLIP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 STK11Q15831 433 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 IMMTQ16891 758 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 ALKBH5Q6P6C2 394 aaKnown RBP3.25□□□□□ -1.89
PTPRK-220ENST00000531466 NCEH1Q6PIU2 408 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 SARM1Q6SZW1 724 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 PPP1R21Q6ZMI0 780 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 CDHR3Q6ZTQ4 885 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 FAM131BQ86XD5 332 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 ZFAND4Q86XD8 727 aa3.25□□□□□ -1.89
PTPRK-220ENST00000531466 ZNF540Q8NDQ6 660 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms