RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RPS19BP1Q86WX3 136 aaKnown RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 MMP21Q8N119 569 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 CPSF7Q8N684 471 aaKnown RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 MDS2Q8NDY4 140 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 HMGCLL1Q8TB92 370 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ZCCHC10Q8TBK6 192 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 M1APQ8TC57 530 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 TMEM125Q96AQ2 219 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 SCMH1Q96GD3 660 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 FRMD6Q96NE9 622 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 PKP4Q99569 1192 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 LPAR4Q99677 370 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 RBCK1Q9BYM8 510 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 KCNJ16Q9NPI9 418 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 ENAMQ9NRM1 1142 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 CRYL1Q9Y2S2 319 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 TCAF1Q9Y4C2 921 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 DUSP10Q9Y6W6 482 aa8.71□□□□□ -1.02
NEDD8-206ENST00000531430 NCOA6Q14686 2063 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 INTS1Q8N201 2190 aaKnown RBP8.71□□□□□ -1.02
NEDD8-206ENST00000531430 IGKV1-8A0A0C4DH67 115 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 A0A1W2PQ72 361 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 A8MUA0 341 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ARHGEF33A8MVX0 844 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 FOXO6A8MYZ6 492 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 E5RI56 91 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 SMAPO00193 183 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PRMT3O60678 531 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PHF2O75151 1096 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 SLC25A12O75746 678 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CATP04040 527 aaKnown RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 APRTP07741 180 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ETS1P14921 441 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PSMA3P25788 255 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 DNAJA1P31689 397 aaKnown RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PTPN7P35236 360 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CYLC1P35663 651 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 AGTR2P50052 363 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 TERF1P54274 439 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CRADDP78560 199 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PMPCAQ10713 525 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 SNX1Q13596 522 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 FAM53BQ14153 422 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 KLHL38Q2WGJ6 581 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ACSBG2Q5FVE4 666 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PCID2Q5JVF3 399 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF468Q5VIY5 522 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 TMEM211Q6ICI0 200 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 H3F3CQ6NXT2 135 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PRSS41Q7RTY9 318 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CD163Q86VB7 1156 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC71Q8IV32 467 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 KLHDC8BQ8IXV7 354 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 OR10Q1Q8NGQ4 319 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PHF10Q8WUB8 498 aaKnown RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ASB5Q8WWX0 329 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ALG3Q92685 438 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 RND1Q92730 232 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PEX11GQ96HA9 241 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 DMRTA2Q96SC8 542 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 NPAS2Q99743 824 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 EBNA1BP2Q99848 306 aaKnown RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 TRIM51Q9BSJ1 452 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 DEFB127Q9H1M4 99 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 P2RY12Q9H244 342 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 RAB6BQ9NRW1 208 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 FAM114A2Q9NRY5 505 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 GALPQ9UBC7 116 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 AMFRQ9UKV5 643 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 PACSIN2Q9UNF0 486 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF148Q9UQR1 794 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 RNF6Q9Y252 685 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 ASB1Q9Y576 335 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 KLK4Q9Y5K2 254 aa8.7□□□□□ -1.02
NEDD8-206ENST00000531430 CPAMD8Q8IZJ3 1885 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 TCRBV7S2A1N4TA0A589 114 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ASPDHA6ND91 283 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF860A6NHJ4 632 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF839A8K0R7 811 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ERI2A8K979 691 aaKnown RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 H0YIG0 161 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ADAM10O14672 748 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 PFDN6O15212 129 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 HS6ST1O60243 411 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 B4GALT2O60909 372 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 NEURL1O76050 574 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 IPO7O95373 1038 aaKnown RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 SERPIND1P05546 499 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 EZRP15311 586 aaKnown RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 NMBRP28336 390 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 HSD17B2P37059 387 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 FDFT1P37268 417 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 BCL6P41182 706 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 CYB561P49447 251 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 MEOX1P50221 254 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 SNRPNP63162 240 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms