RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TAF13Q15543 124 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 UGT3A1Q6NUS8 523 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 FUT10Q6P4F1 479 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ARHGAP11AQ6P4F7 1023 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CCDC83Q8IWF9 413 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CNTN4Q8IWV2 1026 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ARL10Q8N8L6 244 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 FCAMRQ8WWV6 532 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 TSACCQ96A04 125 aaPredicted RBP4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CDCA3Q99618 268 aaPredicted RBP4.1□□□□□ -1.75
C11orf88-204ENST00000529661 C17orf62Q9BQA9 187 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 ACAT2Q9BWD1 397 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 BICC1Q9H694 974 aaKnown RBP4.1□□□□□ -1.75
C11orf88-204ENST00000529661 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 FAM207AQ9NSI2 230 aaPredicted RBP4.1□□□□□ -1.75
C11orf88-204ENST00000529661 PNPLA3Q9NST1 481 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 COMMD8Q9NX08 183 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 STX8Q9UNK0 236 aa4.1□□□□□ -1.75
C11orf88-204ENST00000529661 A0A0A6YYC8 382 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 IGHV4-61A0A0C4DH41 118 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 SMIM1B2RUZ4 78 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 BLOC1S5-TXNDC5H3BN57 136 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 I3L1I5 382 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 TTI1O43156 1089 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CRCPO75575 148 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 IGHV4-59P01825 116 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 HMOX1P09601 288 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 DLATP10515 647 aaKnown RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 KRT3P12035 628 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 STMN1P16949 149 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 PIK3R1P27986 724 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 SERPINB6P35237 376 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 ATP6V1E1P36543 226 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 NPRL3Q12980 569 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 GPR33Q49SQ1 333 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 FAM46CQ5VWP2 391 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 TATDN1Q6P1N9 297 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CTR9Q6PD62 1173 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CPEB2Q7Z5Q1 589 aaKnown RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 PIGZQ86VD9 579 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CCDC60Q8IWA6 550 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 KLHDC8AQ8IYD2 350 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 RCOR2Q8IZ40 523 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CCDC63Q8NA47 563 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 OR8H1Q8NGG4 311 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 FAM76AQ8TAV0 307 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 ATP6V0A1Q93050 837 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CDKN2AIPNLQ96HQ2 116 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 TSSK2Q96PF2 358 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 RASL10BQ96S79 203 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 FSD1Q9BTV5 496 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 OSBPL8Q9BZF1 889 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 MRPL17Q9NRX2 175 aaKnown RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 CYP39A1Q9NYL5 469 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 ZNF624Q9P2J8 865 aaPredicted RBP4.09□□□□□ -1.75
C11orf88-204ENST00000529661 TRPC4Q9UBN4 977 aa4.09□□□□□ -1.75
C11orf88-204ENST00000529661 TRBV5-5A0A0J9YX44 114 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 GTPBP10A4D1E9 387 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 CCL24O00175 119 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 HTATSF1O43719 755 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PCDH7O60245 1069 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 GLRA3O75311 464 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 GLCEO94923 617 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PTMAP06454 111 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PATE4P0C8F1 98 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 SP9P0CG40 484 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 SSTR1P30872 391 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 SFTPDP35247 375 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 CETN2P41208 172 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 SERPINH1P50454 418 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 NR0B1P51843 470 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 CETN1Q12798 172 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 CBX3Q13185 183 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 OPCMLQ14982 345 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 P2RY6Q15077 328 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 HFEQ30201 348 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 LRRC38Q5VT99 294 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 KLHL10Q6JEL2 608 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 FBXL22Q6P050 247 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 SPATA31D1Q6ZQQ2 1576 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 G2E3Q7L622 706 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PRSS42Q7Z5A4 293 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 TRPT1Q86TN4 253 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PRUNE1Q86TP1 453 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 ISCA2Q86U28 154 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 AQP12AQ8IXF9 295 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PRSS35Q8N3Z0 413 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 WDSUB1Q8N9V3 476 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 LPCAT1Q8NF37 534 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 HPSE2Q8WWQ2 592 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 TMEM143Q96AN5 459 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PANX3Q96QZ0 392 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PRMT1Q99873 361 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 PI4K2AQ9BTU6 479 aa4.08□□□□□ -1.76
C11orf88-204ENST00000529661 RBM4Q9BWF3 364 aaKnown RBP4.08□□□□□ -1.76
C11orf88-204ENST00000529661 RAVER2Q9HCJ3 691 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms