RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 OR4K3Q96R72 315 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 FUT8Q9BYC5 575 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 WDR54Q9H977 334 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 PELI2Q9HAT8 420 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ENAMQ9NRM1 1142 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 DNAJC11Q9NVH1 559 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 GEMIN8Q9NWZ8 242 aaKnown RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 NUDT4Q9NZJ9 180 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF282Q9UDV7 671 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 LOC400499M0QZD8 3231 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 TRBC2A0A5B9 178 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CLGNO14967 610 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 P2RX6O15547 441 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 NDUFS4O43181 175 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CCNT2O60583 730 aaKnown RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 STK16O75716 305 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 KLF7O75840 302 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 IGHEP01854 428 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 PRB1P04280 392 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 C2P06681 752 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CXCR2P25025 360 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 GDF5P43026 501 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 GCGRP47871 477 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 GLRBP48167 497 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 SKP1P63208 163 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 RGS1Q08116 209 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 C19orf57Q0VDD7 668 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CDC16Q13042 620 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 DSG2Q14126 1118 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CATSPEREQ5SY80 951 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 UBAP2Q5T6F2 1119 aaKnown RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 MRPL14Q6P1L8 145 aaKnown RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 NXPE4Q6UWF7 544 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 SHISA6Q6ZSJ9 500 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 PRSS58Q8IYP2 241 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 LRRN4CLQ8ND94 238 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 ZCCHC10Q8TBK6 192 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 KCTD4Q8WVF5 259 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 MIEF2Q96C03 454 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 C10orf90Q96M02 699 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 SOX17Q9H6I2 414 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 ANKHQ9HCJ1 492 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 CTSFQ9UBX1 484 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 TUBD1Q9UJT1 453 aa12.74□□□□□ -0.37
CAPN1-215ENST00000528396 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-215ENST00000528396 GCN1Q92616 2671 aaKnown RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 A0A0A6YYC8 382 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 I3L1I5 382 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 KERAO60938 352 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ABHD2P08910 425 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 GFAPP14136 432 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 GMPRP36959 345 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 SLC6A12P48065 614 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 HSPA7P48741 367 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 IRF9Q00978 393 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ATP1A4Q13733 1029 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 FAM53BQ14153 422 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 RBBP7Q16576 425 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 NKG7Q16617 165 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 PDK4Q16654 411 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 C18orf21Q32NC0 220 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 VN1R4Q7Z5H5 301 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 MRGPREQ86SM8 312 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 GSPT2Q8IYD1 628 aaKnown RBP12.73□□□□□ -0.37
CAPN1-215ENST00000528396 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 DTWD1Q8N5C7 304 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 CLEC1AQ8NC01 280 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 NXNL1Q96CM4 212 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 SCYL1Q96KG9 808 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 FER1L6-AS2Q96M78 137 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 MACROD1Q9BQ69 325 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 CRB3Q9BUF7 120 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ING2Q9H160 280 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 SLC22A11Q9NSA0 550 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 IGSF5Q9NSI5 407 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 GPRC5BQ9NZH0 403 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
CAPN1-215ENST00000528396 TRIM49D1C9J1S8 452 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 UBXN8O00124 270 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 RIPK2O43353 540 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 KLHL2O95198 593 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MED26O95402 600 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ONECUT2O95948 504 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ALDOAP04075 364 aaKnown RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 SNRPAP09012 282 aaKnown RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 FAM153BP0C7A2 387 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms