RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FAM81BQ96LP2 452 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 C17orf77Q96MU5 243 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 SLC22A12Q96S37 553 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CDRT15Q96T59 188 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 SLC5A7Q9GZV3 580 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PPIL3Q9H2H8 161 aaKnown RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 SUDS3Q9H7L9 328 aaPredicted RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 TXLNGQ9NUQ3 528 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CNIH4Q9P003 139 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 LARSQ9P2J5 1176 aaKnown RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 CDH7Q9ULB5 785 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ITM2BQ9Y287 266 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ASB3Q9Y575 518 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 WDR81Q562E7 1941 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 NPHP3Q7Z494 1330 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 POLR3AO14802 1390 aaPredicted RBP5.42□□□□□ -1.54
PCF11-202ENST00000528336 NINLQ9Y2I6 1382 aa5.42□□□□□ -1.54
PCF11-202ENST00000528336 PPIP5K1Q6PFW1 1433 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 KIF1AQ12756 1690 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 PXDNQ92626 1479 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 TEX13DA0A0J9YY54 714 aaPredicted RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 A0A1W2PPI3 338 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 ARHGEF37A1IGU5 675 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SPAG6O75602 509 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SLITRK3O94933 977 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 REC8O95072 547 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 ADCY5O95622 1261 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 TPBGLP0DKB5 382 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 MSH3P20585 1137 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 CBLP22681 906 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SOX6P35712 828 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 MAGEA4P43358 317 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 BMXP51813 675 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 STAT2P52630 851 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 ADARP55265 1226 aaKnown RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 ASIC1P78348 528 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 PRKCZQ05513 592 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 CXCL9Q07325 125 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 TEFQ10587 303 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 DMP1Q13316 513 aaPredicted RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 MELKQ14680 651 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 KIR2DS3Q14952 304 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 GCNT6Q5T4J0 391 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 PM20D1Q6GTS8 502 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 TMEM270Q6UE05 265 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 GBP6Q6ZN66 633 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 ANO5Q75V66 913 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 HAUS6Q7Z4H7 955 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SPATA19Q7Z5L4 167 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SFRP1Q8N474 314 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 CCDC110Q8TBZ0 833 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 RAB7BQ96AH8 199 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 MRPL38Q96DV4 380 aaKnown RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 FAM210AQ96ND0 272 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 RUFY1Q96T51 708 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 KCNK16Q96T55 309 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 SPATC1LQ9H0A9 340 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 KCNK15Q9H427 330 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 APOBEC3GQ9HC16 384 aaKnown RBP5.41□□□□□ -1.54
PCF11-202ENST00000528336 TRPV5Q9NQA5 729 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 ZNF148Q9UQR1 794 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 CHKBQ9Y259 395 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 CLCA3PQ9Y6N3 262 aa5.41□□□□□ -1.54
PCF11-202ENST00000528336 TOPAZ1Q8N9V7 1692 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 SMCHD1A6NHR9 2005 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 LINC00854A0A1B0GVQ3 168 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 H0YIN7 160 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 MAGEB3O15480 346 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 LINC01565O15544 149 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 GPR137BO60478 399 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CAVIN2O95810 425 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 NR3C1P04150 777 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CKMT2P17540 419 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 TRIM21P19474 475 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 KIAA1024LP59773 190 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 KRTAP10-9P60411 292 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CHIT1Q13231 466 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 RIPK1Q13546 671 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 ZNF273Q14593 569 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 ETFRF1Q6IPR1 90 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CENPPQ6IPU0 288 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 KLC3Q6P597 504 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 DGLUCYQ7Z3D6 616 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 LDB1Q86U70 411 aaPredicted RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 TLK2Q86UE8 772 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 HOOK3Q86VS8 718 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 PI4KAP1Q8N8J0 262 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 WDR20Q8TBZ3 569 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 ERLEC1Q96DZ1 483 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 DTNBP1Q96EV8 351 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CNOT6LQ96LI5 555 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 RBM14Q96PK6 669 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 PSD2Q9BQI7 771 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 MGME1Q9BQP7 344 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 UTP14AQ9BVJ6 771 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 DPH5Q9H2P9 285 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 CRLF2Q9HC73 371 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms