RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 IQCCQ4KMZ1 466 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 ZNF697Q5TEC3 545 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 ERAP2Q6P179 960 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 EIF3MQ7L2H7 374 aaKnown RBP16.95■□□□□ 0.3
USH1C-205ENST00000527020 PIK3C3Q8NEB9 887 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 GPR156Q8NFN8 814 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 COQ8BQ96D53 544 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 HSH2DQ96JZ2 352 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 RPS6KA6Q9UK32 745 aa16.95■□□□□ 0.3
USH1C-205ENST00000527020 PSMD11O00231 422 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 KPNA3O00505 521 aaPredicted RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 MYO1DO94832 1006 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 FABP3P05413 133 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CTNNB1P35222 781 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 IRS1P35568 1242 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 ASMTP46597 345 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 PLA2G16P53816 162 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 RPS13P62277 151 aaKnown RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 TBPL1P62380 186 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 IL18R1Q13478 541 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CPTPQ5TA50 214 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 KDM4DQ6B0I6 523 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 BPIFB6Q8NFQ5 453 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 B4GALNT2Q8NHY0 566 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CNIH3Q8TBE1 160 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 EZH1Q92800 747 aaPredicted RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 RSPRY1Q96DX4 576 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CSF3RQ99062 836 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 EPHX3Q9H6B9 360 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 GMEB1Q9Y692 573 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 C5orf42Q9H799 3197 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CHD9Q3L8U1 2897 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 A0A0J9YVX5 310 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 TMEM229AB2RXF0 380 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 H3BM21 787 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 HOXA9P31269 272 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 TIA1P31483 386 aaKnown RBP eCLIP16.94■□□□□ 0.3
USH1C-205ENST00000527020 BMPR1AP36894 532 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CLK3P49761 638 aaKnown RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 GALK1P51570 392 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 NFATC3Q12968 1075 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CDK5R2Q13319 367 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 TOP3AQ13472 1001 aaPredicted RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 VEZF1Q14119 521 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 BCL7AQ4VC05 210 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 ZNF385BQ569K4 471 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 CATSPEREQ5SY80 951 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 LAIR1Q6GTX8 287 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 RTL10Q7L3V2 364 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 TMPRSS11BQ86T26 416 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 FBXO15Q8NCQ5 510 aaPredicted RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 TBC1D15Q8TC07 691 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 ZFP90Q8TF47 636 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 STARD8Q92502 1023 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 TRIT1Q9H3H1 467 aaKnown RBP16.94■□□□□ 0.3
USH1C-205ENST00000527020 FZD4Q9ULV1 537 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 KCNE2Q9Y6J6 123 aa16.94■□□□□ 0.3
USH1C-205ENST00000527020 KIAA0100Q14667 2235 aaKnown RBP16.93■□□□□ 0.3
USH1C-205ENST00000527020 ADH5P11766 374 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 NPPBP16860 134 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 PCMT1P22061 227 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 MAPK9P45984 424 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 CAMK1Q14012 370 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 SPIN4Q56A73 249 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 NPAS3Q8IXF0 933 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 SP7Q8TDD2 431 aaPredicted RBP16.93■□□□□ 0.3
USH1C-205ENST00000527020 ZNF566Q969W8 418 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 FKBP10Q96AY3 582 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 BLOC1S6Q9UL45 172 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 ORC6Q9Y5N6 252 aa16.93■□□□□ 0.3
USH1C-205ENST00000527020 MYO1GB0I1T2 1018 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 ZNF8P17098 575 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 FPR1P21462 350 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 DNAJA1P31689 397 aaKnown RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 PDE12Q6L8Q7 609 aaKnown RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 MED27Q6P2C8 311 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 GALNT18Q6P9A2 607 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PIWIL3Q7Z3Z3 882 aaKnown RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 ZC3H7AQ8IWR0 971 aaKnown RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 CFAP206Q8IYR0 622 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.92■□□□□ 0.3
USH1C-205ENST00000527020 MUL1Q969V5 352 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 ARRDC3Q96B67 414 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 WDR34Q96EX3 536 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 OR2AG1Q9H205 316 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PRRT4C9JH25 899 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 SLC9A3R1O14745 358 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 XPNPEP2O43895 674 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 PCDH7O60245 1069 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 GCM2O75603 506 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 INHBBP09529 407 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 CCDC159P0C7I6 412 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 CYP4B1P13584 511 aa16.92■□□□□ 0.3
USH1C-205ENST00000527020 ZNF182P17025 639 aaPredicted RBP16.92■□□□□ 0.3
USH1C-205ENST00000527020 CCNA2P20248 432 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms