RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 IRF8Q02556 426 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TGM3Q08188 693 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 DLG1Q12959 904 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PWP1Q13610 501 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 DSG2Q14126 1118 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM53BQ14153 422 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ERV3-1Q14264 604 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLBPQ14493 270 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC9A5Q14940 896 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 HERC3Q15034 1050 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SETDB1Q15047 1291 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 RASA2Q15283 850 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PFKFB4Q16877 469 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 UGT8Q16880 541 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ERCC6LQ2NKX8 1250 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRTGQ2VWP7 1150 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CRTC2Q53ET0 693 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 XKR6Q5GH73 641 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TECRLQ5HYJ1 363 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CATSPEREQ5SY80 951 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 UBAP2Q5T6F2 1119 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 IRAK1BP1Q5VVH5 260 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATG9BQ674R7 924 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 METTL2BQ6P1Q9 378 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 FBXO42Q6P3S6 717 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM199XQ6PEV8 388 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 BORAQ6PGQ7 559 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM198BQ6UWH4 519 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMIGD1Q6UXZ0 262 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TIFABQ6ZNK6 161 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ABHD13Q7L211 337 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CROCCP2Q86T23 111 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TDRPQ86YL5 185 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLD3Q8IV08 490 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4N4Q8N0Y3 316 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 METTL27Q8N6F8 245 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TEX9Q8N6V9 391 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCDC63Q8NA47 563 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MFSD9Q8NBP5 474 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC38A9Q8NBW4 561 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZCCHC10Q8TBK6 192 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PPP4R1Q8TF05 950 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 AENQ8WTP8 325 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 UBTD2Q8WUN7 234 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SNRNP27Q8WVK2 155 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 APOBEC4Q8WW27 367 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC13A3Q8WWT9 602 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CAVIN3Q969G5 261 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP6V1E2Q96A05 226 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 REPS1Q96D71 796 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTCD3Q96EY7 689 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MMABQ96EY8 250 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SEC16BQ96JE7 1060 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAGEB10Q96LZ2 347 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF285Q96NJ3 590 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 GBP5Q96PP8 586 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR2A5Q96R48 311 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR4K3Q96R72 315 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATOH8Q96SQ7 321 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CENPKQ9BS16 269 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM79Q9BSE2 394 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PARD6BQ9BYG5 372 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 WDR54Q9H977 334 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACTR8Q9H981 624 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 C14orf105Q9NVL8 296 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 XPR1Q9UBH6 696 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRPC4Q9UBN4 977 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF282Q9UDV7 671 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 IL17BQ9UHF5 180 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 DCDC2Q9UHG0 476 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZFP69BQ9UJL9 534 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MID2Q9UJV3 735 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTBP2Q9UKA9 531 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TCFL5Q9UL49 500 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SH2B3Q9UQQ2 575 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 RUVBL1Q9Y265 456 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAN2B2Q9Y2E5 1009 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SSUH2Q9Y2M2 353 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTRH2Q9Y3E5 179 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 PIKFYVEQ9Y2I7 2098 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACACBO00763 2458 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 BPTFQ12830 3046 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 A0A0A6YYC8 382 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 H0YIG0 161 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 H3BMH7 237 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 STX16-NPEPL1H3BU86 382 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 I3L1I5 382 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 GOLGA8RI6L899 631 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TK2O00142 265 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PSMD12O00232 456 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 COPEO14579 308 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 STX16O14662 325 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCDH17O14917 1159 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NKX2-8O15522 239 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 TAPBPO15533 448 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLHL41O60662 606 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 UGDHO60701 494 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 NSA2O95478 260 aaKnown RBP5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 STATHP02808 62 aa5.14□□□□□ -1.59
HMGB1P40-201ENST00000525121 SHBGP04278 402 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms