RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 H0Y3Z8 333 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 DHHO43323 396 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 TLX2O43763 284 aaPredicted RBP6.64□□□□□ -1.35
NEDD8-203ENST00000524927 HKR1P10072 659 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 CHRNB4P30926 498 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 PAPOLAP51003 745 aaKnown RBP6.64□□□□□ -1.35
NEDD8-203ENST00000524927 GSDMDP57764 484 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 NUCB2P80303 420 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 RAB41Q5JT25 222 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 BSPRYQ5W0U4 402 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 MSANTD2Q6P1R3 559 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 SLC30A9Q6PML9 568 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 C12orf54Q6X4T0 127 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 BHLHA9Q7RTU4 235 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 LGI2Q8N0V4 545 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 CCAR2Q8N163 923 aaKnown RBP6.64□□□□□ -1.35
NEDD8-203ENST00000524927 ANKRD20A12PQ8NF67 263 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 CPT1BQ92523 772 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 CAVIN3Q969G5 261 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 RFKQ969G6 155 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 SH3KBP1Q96B97 665 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 PRR25Q96S07 402 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 REEP2Q9BRK0 252 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 ABCC13Q9NSE7 274 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 MGAT4CQ9UBM8 478 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 VPS28Q9UK41 221 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 C19orf53Q9UNZ5 99 aaPredicted RBP6.64□□□□□ -1.35
NEDD8-203ENST00000524927 EXOC7Q9UPT5 735 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 CNTN6Q9UQ52 1028 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 TRAV17A0A0B4J275 112 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 GOLGA8IPA6NC78 632 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 GOLGA8JA6NMD2 632 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 A8MVJ9 347 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 K7ERQ8 282 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 ADAM10O14672 748 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 EIF3DO15371 548 aaKnown RBP eCLIP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 SMAD6O43541 496 aaKnown RBP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 AGR2O95994 175 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 NDUFB7P17568 137 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 CD58P19256 250 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 AK4P27144 223 aaPredicted RBP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 OTX2P32243 289 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 MYL6P60660 151 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 AIMP2Q13155 320 aaKnown RBP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 GPS2Q13227 327 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 TRPC3Q13507 836 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 ZNF805Q5CZA5 627 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 FNDC7Q5VTL7 733 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 FAM69BQ5VUD6 431 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 USF3Q68DE3 2245 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 CCDC144NLQ6NUI1 221 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 C22orf39Q6P5X5 142 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 ZNF551Q7Z340 670 aaPredicted RBP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 YTHDF3Q7Z739 585 aaKnown RBP6.63□□□□□ -1.35
NEDD8-203ENST00000524927 TRABD2AQ86V40 505 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 PAQR7Q86WK9 346 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 SFRP1Q8N474 314 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 SLC37A2Q8TED4 501 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 AGAP11Q8TF27 550 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 SDCBP2Q9H190 292 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 CCDC134Q9H6E4 229 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 MMRN2Q9H8L6 949 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 P4HTMQ9NXG6 502 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 PADI2Q9Y2J8 665 aa6.63□□□□□ -1.35
NEDD8-203ENST00000524927 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
NEDD8-203ENST00000524927 TRIM49BA6NDI0 452 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A18PA6NE21 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A16PA6NEW6 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A9PA6NNJ1 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A5PA8MXJ8 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 SPTLC2O15270 562 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 SPRY2O43597 315 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
NEDD8-203ENST00000524927 CAPN1P07384 714 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A15PP0C7V4 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 FAM90A14PP0C7W9 464 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 NELFEP18615 380 aaKnown RBP6.62□□□□□ -1.35
NEDD8-203ENST00000524927 MAKP20794 623 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 RRM1P23921 792 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 CNTFP26441 200 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 DDIT3P35638 169 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 PEX19P40855 299 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 AVPR1BP47901 424 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 POLD2P49005 469 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 TKTL1P51854 596 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 GFERP55789 205 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 MRPS35P82673 323 aaKnown RBP6.62□□□□□ -1.35
NEDD8-203ENST00000524927 SF3A3Q12874 501 aaKnown RBP eCLIP6.62□□□□□ -1.354e-7■■■□□ 16.8
NEDD8-203ENST00000524927 CYP1B1Q16678 543 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 MIDNQ504T8 468 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 KRTCAP3Q53RY4 240 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 ZNF667Q5HYK9 610 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 TTC22Q5TAA0 569 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 IRAK1BP1Q5VVH5 260 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 GRHL2Q6ISB3 625 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 Q6ZWC4 215 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 PRSS42Q7Z5A4 293 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 MEX3DQ86XN8 651 aaKnown RBP6.62□□□□□ -1.35
NEDD8-203ENST00000524927 GPD1LQ8N335 351 aa6.62□□□□□ -1.35
NEDD8-203ENST00000524927 CATSPER1Q8NEC5 780 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms