RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 SYNJ1O43426 1573 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 SMARCA4P51532 1647 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 A0A087X002 238 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 SNURFLB1AK76 121 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 H0YAE9 185 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 IGLV1-44P01699 117 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 F3P13726 295 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 ZNF26P17031 533 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 CTNNA1P35221 906 aaKnown RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 SFTPDP35247 375 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 TCF7P36402 384 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 LEPRP48357 1165 aaKnown RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 SP3Q02447 781 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 ADAMTSL4-AS1Q5T5F5 129 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 TTC27Q6P3X3 843 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 CASC4Q6P4E1 433 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 Q6ZSR9 355 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 BTN2A1Q7KYR7 527 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 OTOAQ7RTW8 1153 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 CPEB2Q7Z5Q1 589 aaKnown RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 DCLK2Q8N568 766 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 LRTM2Q8N967 370 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 DBF4BQ8NFT6 615 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 GDAP1Q8TB36 358 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 AZIN2Q96A70 460 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 CENPTQ96BT3 561 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 BTBD9Q96Q07 612 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 PARK7Q99497 189 aaKnown RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 NKX3-1Q99801 234 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 RIMS4Q9H426 269 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 RNF121Q9H920 327 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 COPS7BQ9H9Q2 264 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 TUFT1Q9NNX1 390 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 TMEM181Q9P2C4 612 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 ARMCX3Q9UH62 379 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 LEF1Q9UJU2 399 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 PRDM4Q9UKN5 801 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
PCM1-220ENST00000523896 WDR37Q9Y2I8 494 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 KLK4Q9Y5K2 254 aa3.34□□□□□ -1.87
PCM1-220ENST00000523896 DIP2BQ9P265 1576 aa3.34□□□□□ -1.88
PCM1-220ENST00000523896 A0A087WUV0 522 aaPredicted RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 PRSS46E5RG02 174 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 NR5A2O00482 541 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ST8SIA3O43173 380 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 TGDSO95455 350 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 YES1P07947 543 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD34CP0C6C1 535 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ATP5DP30049 168 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ALDH1B1P30837 517 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 DUTP33316 252 aaKnown RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 LBX1P52954 281 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 SNRPD1P62314 119 aaKnown RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 GUCY2DQ02846 1103 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 SRSF9Q13242 221 aaKnown RBP eCLIP3.33□□□□□ -1.88
PCM1-220ENST00000523896 SGCGQ13326 291 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 HNRNPDQ14103 355 aaKnown RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 E2F5Q15329 346 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD20A4Q4UJ75 823 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD20A8PQ5CZ79 823 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD20A2Q5SQ80 823 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 C1QTNF12Q5T7M4 302 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD20A1Q5TYW2 823 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ANKRD20A3Q5VUR7 823 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 PWWP2BQ6NUJ5 590 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FUT10Q6P4F1 479 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 BHLHB9Q6PI77 547 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 PRSS55Q6UWB4 352 aaPredicted RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 SLC24A5Q71RS6 500 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FCRLAQ7L513 359 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 PRUNE1Q86TP1 453 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 CREBRFQ8IUR6 639 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 GPC2Q8N158 579 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 PRSS35Q8N3Z0 413 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 WDSUB1Q8N9V3 476 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 UXS1Q8NBZ7 420 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FIBINQ8TAL6 211 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 ATP6V1E2Q96A05 226 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 MAGED4Q96JG8 741 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 PI4K2AQ9BTU6 479 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 UBQLN3Q9H347 655 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FGF22Q9HCT0 170 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 IARS2Q9NSE4 1012 aaKnown RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 ARGLU1Q9NWB6 273 aaPredicted RBP3.33□□□□□ -1.88
PCM1-220ENST00000523896 SLCO1C1Q9NYB5 712 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 VPS18Q9P253 973 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 LIPT1Q9Y234 373 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 SNAPC4Q5SXM2 1469 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 IFT140Q96RY7 1462 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 FANCD2Q9BXW9 1451 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 LTBP4Q8N2S1 1624 aa3.33□□□□□ -1.88
PCM1-220ENST00000523896 A0A0B4J203 849 aa3.32□□□□□ -1.88
PCM1-220ENST00000523896 ILVBLA1L0T0 632 aa3.32□□□□□ -1.88
PCM1-220ENST00000523896 A4D1N5 150 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms