RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 H3BMM5 538 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 STATHP02808 62 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 ESR1P03372 595 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 CATP04040 527 aaKnown RBP21.44■■□□□ 1.02
PVT1-218ENST00000523328 ADARP55265 1226 aaKnown RBP21.44■■□□□ 1.02
PVT1-218ENST00000523328 ABATP80404 500 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 KCNJ11Q14654 390 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 MEP1AQ16819 746 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 MFSD4BQ5TF39 518 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 VN1R4Q7Z5H5 301 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 ADCK2Q7Z695 626 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 CHERPQ8IWX8 916 aaKnown RBP21.44■■□□□ 1.02
PVT1-218ENST00000523328 LRRC56Q8IYG6 542 aaPredicted RBP21.44■■□□□ 1.02
PVT1-218ENST00000523328 OTUD6BQ8N6M0 293 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 OR51Q1Q8NH59 317 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 MFSD3Q96ES6 412 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 TRIM51Q9BSJ1 452 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 FRMD8P1Q9BZ68 369 aaPredicted RBP21.44■■□□□ 1.02
PVT1-218ENST00000523328 IL22Q9GZX6 179 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 MCCC2Q9HCC0 563 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 FAM114A2Q9NRY5 505 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 PAK5Q9P286 719 aa21.44■■□□□ 1.02
PVT1-218ENST00000523328 ZNF839A8K0R7 811 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 GOLGA8KD6RF30 607 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 GOLGA8TH3BQL2 631 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 SMAPO00193 183 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 ZNHIT1O43257 154 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 ASNA1O43681 348 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 VAPBO95292 243 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 ZSCAN5DPP0CG00 497 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 CHRM3P20309 590 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 XCR1P46094 333 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 TLE4Q04727 773 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 PTK6Q13882 451 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 MRNIPQ6NTE8 343 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 GALNTL5Q7Z4T8 443 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 TMEM178AQ8NBL3 297 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 M1APQ8TC57 530 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 AGAP11Q8TF27 550 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 PHF10Q8WUB8 498 aaKnown RBP21.43■■□□□ 1.02
PVT1-218ENST00000523328 C1orf54Q8WWF1 131 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 TREX2Q9BQ50 279 aaPredicted RBP21.43■■□□□ 1.02
PVT1-218ENST00000523328 MMP25Q9NPA2 562 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 EIF2B3Q9NR50 452 aaKnown RBP21.43■■□□□ 1.02
PVT1-218ENST00000523328 CRYL1Q9Y2S2 319 aa21.43■■□□□ 1.02
PVT1-218ENST00000523328 H7BY64 318 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 CD46P15529 392 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 RPL22P35268 128 aaKnown RBP21.42■■□□□ 1.02
PVT1-218ENST00000523328 AGTR2P50052 363 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 EXT1Q16394 746 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 KRTAP21-3Q3LHN1 58 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 RNF187Q5TA31 235 aaPredicted RBP21.42■■□□□ 1.02
PVT1-218ENST00000523328 CES3Q6UWW8 571 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 PCGF5Q86SE9 256 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 SDCCAG8Q86SQ7 713 aaPredicted RBP21.42■■□□□ 1.02
PVT1-218ENST00000523328 REXO1L1PQ8IX06 675 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 CCDC89Q8N998 374 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 FBXO15Q8NCQ5 510 aaPredicted RBP21.42■■□□□ 1.02
PVT1-218ENST00000523328 CHTF18Q8WVB6 975 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 SPG11Q96JI7 2443 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 PRAP1Q96NZ9 151 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 DMRTA2Q96SC8 542 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 TCF12Q99081 682 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 KIFC1Q9BW19 673 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 ABCF3Q9NUQ8 709 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 HCN3Q9P1Z3 774 aa21.42■■□□□ 1.02
PVT1-218ENST00000523328 GABRR3A8MPY1 467 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 ADAM10O14672 748 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 NEURL1O76050 574 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 ABOP16442 354 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 IL1RNP18510 177 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 BCL6P41182 706 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 NPY2RP49146 381 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 CSNK1G2P78368 415 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 HSF1Q00613 529 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 SNX1Q13596 522 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.41■■□□□ 1.02
PVT1-218ENST00000523328 KIAA1328Q86T90 577 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 DOLPP1Q86YN1 238 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 GHDCQ8N2G8 530 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 SLC30A3Q99726 388 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 EBNA1BP2Q99848 306 aaKnown RBP21.41■■□□□ 1.02
PVT1-218ENST00000523328 MACROD1Q9BQ69 325 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 BFARQ9NZS9 450 aa21.41■■□□□ 1.02
PVT1-218ENST00000523328 HCFC1P51610 2035 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 E9PLN8 166 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 SP1P08047 785 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 CLCN7P51798 805 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 RNFT1Q5M7Z0 435 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 TMEM214Q6NUQ4 689 aaKnown RBP21.4■■□□□ 1.02
PVT1-218ENST00000523328 PAPD4Q6PIY7 484 aaKnown RBP21.4■■□□□ 1.02
PVT1-218ENST00000523328 C3P1Q6ZMU1 363 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 SPNS2Q8IVW8 549 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 MCOLN3Q8TDD5 553 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 VKORC1Q9BQB6 163 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 SYBUQ9NX95 663 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 ASB1Q9Y576 335 aa21.4■■□□□ 1.02
PVT1-218ENST00000523328 INTS1Q8N201 2190 aaKnown RBP21.39■■□□□ 1.01
PVT1-218ENST00000523328 KCNE1BA0A087WTH5 132 aa21.39■■□□□ 1.01
PVT1-218ENST00000523328 SGK494L7N484 410 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms