RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SOCS6O14544 535 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 GFPT2O94808 682 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 SNUPNO95149 360 aaKnown RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 F10P00742 488 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 IGHEP01854 428 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 GPR89BP0CG08 455 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 UNGP13051 313 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ST6GAL1P15907 406 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 HLA-DPA1P20036 260 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 AGAP20933 346 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 COMTP21964 271 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 CDH3P22223 829 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ADSLP30566 484 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 PPP1R2P41236 205 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 HALP42357 657 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 PMP22Q01453 160 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 CDR2Q01850 454 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 MFAP5Q13361 173 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 NFE2L1Q14494 772 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 DEFB110Q30KQ9 67 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 RPUSD3Q6P087 351 aaKnown RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 DNAJC24Q6P3W2 148 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 CDHR3Q6ZTQ4 885 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 MON1BQ7L1V2 547 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ZBTB46Q86UZ6 589 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 TMEM200AQ86VY9 491 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ATPAF2Q8N5M1 289 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ADAMTS18Q8TE60 1221 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ZNF480Q8WV37 535 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 AGAP3Q96P47 875 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 LYSMD1Q96S90 227 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 FOXC2Q99958 501 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 NUP85Q9BW27 656 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 SLC22A11Q9NSA0 550 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 PKD2L2Q9NZM6 624 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 CWC15Q9P013 229 aaKnown RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ADAM22Q9P0K1 906 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 DHCR7Q9UBM7 475 aaKnown RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 SEC14L3Q9UDX4 400 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 PCSK1NQ9UHG2 260 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 SLC24A2Q9UI40 661 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 ST6GALNAC2Q9UJ37 374 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 TTLL3Q9Y4R7 772 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 HS3ST3B1Q9Y662 390 aa6.06□□□□□ -1.44
VPS13B-211ENST00000522802 INTS1Q8N201 2190 aaKnown RBP6.06□□□□□ -1.44
VPS13B-211ENST00000522802 SIGLEC16A6NMB1 481 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ZNHIT1O43257 154 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 VEGFDO43915 354 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 CDK14O94921 469 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PIRTP0C851 137 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 UCHL3P15374 230 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 IGFBP2P18065 325 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 POLR2CP19387 275 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ITGAXP20702 1163 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 MMP11P24347 488 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PBLDP30039 288 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NSFP46459 744 aaKnown RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 GZMKP49863 264 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 TNFSF10P50591 281 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 SMSP52788 366 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 CTSCP53634 463 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 DCDC1P59894 354 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ARG2P78540 354 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NIPAL4Q0D2K0 466 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NOMO1Q15155 1222 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 CEBPEQ15744 281 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 INAQ16352 499 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ANKRD20A8PQ5CZ79 823 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 FKBP15Q5T1M5 1219 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 MARC1Q5VT66 337 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 KLHDC7AQ5VTJ3 777 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 TMEM198Q66K66 360 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ARMC6Q6NXE6 501 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 KIRREL2Q6UWL6 708 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ISLR2Q6UXK2 745 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 SHISA6Q6ZSJ9 500 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PHF13Q86YI8 300 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NDUFAF2Q8N183 169 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 CHDHQ8NE62 594 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NAT14Q8WUY8 206 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 NRG4Q8WWG1 115 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PTERQ96BW5 349 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 THOC3Q96J01 351 aaKnown RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PITPNM3Q9BZ71 974 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 TRIM7Q9C029 511 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 POLR1EQ9GZS1 481 aaKnown RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 LHPPQ9H008 270 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 WWP1Q9H0M0 922 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 KIR3DX1Q9H7L2 352 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 PCDH9Q9HC56 1237 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 ABI3Q9P2A4 366 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 IFT80Q9P2H3 777 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-211ENST00000522802 CDC23Q9UJX2 597 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 DNPEPQ9ULA0 475 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 INTUQ9ULD6 942 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 MEMO1Q9Y316 297 aa6.05□□□□□ -1.44
VPS13B-211ENST00000522802 LUC7L2Q9Y383 392 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms