RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 A0A0J9YVX5 310 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 MBD3L4A6NDZ8 208 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 MBD3L5A6NJ08 208 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 PES1O00541 588 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 AP2A1O95782 977 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 FTLP02792 175 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 EPHA1P21709 976 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 TPP2P29144 1249 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 KRT81Q14533 505 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 POU4F3Q15319 338 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 MUM1Q2TAK8 710 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 SEM1Q6ZVN7 128 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 TAX1BP1Q86VP1 789 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 POGLUT1Q8NBL1 392 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 PPP1R14CQ8TAE6 165 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 M1APQ8TC57 530 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 BLOC1S5Q8TDH9 187 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZFYVE21Q9BQ24 234 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 PLCD4Q9BRC7 762 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 SARGQ9BW04 601 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 CDCP1Q9H5V8 836 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 MKKSQ9NPJ1 570 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 TAB2Q9NYJ8 693 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 POLG2Q9UHN1 485 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 PKP3Q9Y446 797 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 KLK4Q9Y5K2 254 aa8.3□□□□□ -1.08
TRAPPC9-212ENST00000521944 PINLYPA6NC86 204 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 CLCA1A8K7I4 914 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 TARM1B6A8C7 271 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 PEX1O43933 1283 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 CNOT4O95628 575 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 EPOP01588 193 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 EIF2S1P05198 315 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 PRSS56P0CW18 603 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 CD9P21926 228 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 ITGA8P53708 1063 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 MSLNQ13421 630 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC1A5Q15758 541 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 FBXL19-AS1Q494R0 122 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 TCP11X2Q5H9J9 407 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 CCDC70Q6NSX1 233 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZNF585AQ6P3V2 769 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 B3GNT6Q6ZMB0 384 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 RNF44Q7L0R7 432 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 ANKRD37Q7Z713 158 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 KIF2BQ8N4N8 673 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 HORMAD2Q8N7B1 307 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 PLD5Q8N7P1 536 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 NIPA2Q8N8Q9 360 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 NAXEQ8NCW5 288 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 OR4K2Q8NGD2 314 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 RNASE6Q93091 150 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 DCUN1D1Q96GG9 259 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 OXNAD1Q96HP4 312 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 PIP5K1AQ99755 562 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 CNPPD1Q9BV87 410 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 DEPPQ9NTK1 212 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 TRMT1Q9NXH9 659 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 SOX13Q9UN79 622 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 RUVBL1Q9Y265 456 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 NPFFR2Q9Y5X5 522 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 LIPGQ9Y5X9 500 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 PRSS21Q9Y6M0 314 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 HEATR5BQ9P2D3 2071 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 DSCAMO60469 2012 aa8.29□□□□□ -1.08
TRAPPC9-212ENST00000521944 A0A0U1RQJ8 604 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC5A10A0PJK1 596 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 GOLGA6L4A6NEF3 574 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 TUBAL3A6NHL2 446 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARHGEF33A8MVX0 844 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 H0YGG7 62 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 DDX3XO00571 662 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 CCL22O00626 93 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 STX7O15400 261 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 SMPD2O60906 423 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 IFNA2P01563 188 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 HSP90AA1P07900 732 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 PTPN3P26045 913 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 PSMB5P28074 263 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 CDC25BP30305 580 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 TRHRP34981 398 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 PEX19P40855 299 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 CYB561P49447 251 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 GPR85P60893 370 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARF3P61204 181 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 BRD3Q15059 726 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 SF1Q15637 639 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 TEX44Q53QW1 395 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 ERICH6BQ5W0A0 696 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 HEPHL1Q6MZM0 1159 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 LRRC8BQ6P9F7 803 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 MDGA2Q7Z553 956 aa8.28□□□□□ -1.08
TRAPPC9-212ENST00000521944 PAQR7Q86WK9 346 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms