RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TFEBP19484 476 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 TYK2P29597 1187 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 VSX2P58304 361 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 FAM153CQ494X1 144 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 LCN10Q6JVE6 187 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 MBOAT1Q6ZNC8 495 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 LAS2Q8IYD9 372 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 C2orf73Q8N5S3 287 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 ENDOVQ8N8Q3 282 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 LRRN4CLQ8ND94 238 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 MYRIPQ8NFW9 859 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 NEIL2Q969S2 332 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 MRPL57Q9BQC6 102 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 RHOXF2Q9BQY4 288 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 MLXIPLQ9NP71 852 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 NDOR1Q9UHB4 597 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 RUVBL1Q9Y265 456 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 KRT87PA6NCN2 255 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 URADA6NGE7 173 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 H7BY64 318 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 MAP2K7O14733 419 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 CDH1P12830 882 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 BCL6P41182 706 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 TSFMP43897 325 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 CCR10P46092 362 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 SLC9A5Q14940 896 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 HERC3Q15034 1050 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 THEMIS2Q5TEJ8 643 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 SH2D5Q6ZV89 423 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 RAPH1Q70E73 1250 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 CMC1Q7Z7K0 106 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 KRT78Q8N1N4 520 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ADAMTS18Q8TE60 1221 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 CREB3L4Q8TEY5 395 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 APOBEC4Q8WW27 367 aaKnown RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 PRAP1Q96NZ9 151 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ROPN1BQ9BZX4 212 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 SLC7A5P2Q9GIP4 190 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 KLHL25Q9H0H3 589 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ATG10Q9H0Y0 220 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ROPN1Q9HAT0 212 aaPredicted RBP9.01□□□□□ -0.97
CLK4-209ENST00000521621 CIDEBQ9UHD4 219 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 SH2B3Q9UQQ2 575 aa9.01□□□□□ -0.97
CLK4-209ENST00000521621 ACACBO00763 2458 aa9□□□□□ -0.97
CLK4-209ENST00000521621 LOC102723996A0A087X1L8 192 aa9□□□□□ -0.97
CLK4-209ENST00000521621 A0A0J9YVX5 310 aa9□□□□□ -0.97
CLK4-209ENST00000521621 K7EPI3 171 aa9□□□□□ -0.97
CLK4-209ENST00000521621 FOXS1O43638 330 aa9□□□□□ -0.97
CLK4-209ENST00000521621 WFS1O76024 890 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SLC35G6P0C7Q6 338 aa9□□□□□ -0.97
CLK4-209ENST00000521621 FOLR3P41439 243 aa9□□□□□ -0.97
CLK4-209ENST00000521621 AVPR1BP47901 424 aa9□□□□□ -0.97
CLK4-209ENST00000521621 RRADP55042 308 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SLC29A2Q14542 456 aa9□□□□□ -0.97
CLK4-209ENST00000521621 PDK4Q16654 411 aa9□□□□□ -0.97
CLK4-209ENST00000521621 DEFB110Q30KQ9 67 aa9□□□□□ -0.97
CLK4-209ENST00000521621 GGTA1PQ4G0N0 100 aa9□□□□□ -0.97
CLK4-209ENST00000521621 PAGE2BQ5JRK9 111 aa9□□□□□ -0.97
CLK4-209ENST00000521621 UBAP2Q5T6F2 1119 aaKnown RBP9□□□□□ -0.97
CLK4-209ENST00000521621 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
CLK4-209ENST00000521621 MROH9Q5TGP6 573 aa9□□□□□ -0.97
CLK4-209ENST00000521621 LIPJQ5W064 366 aa9□□□□□ -0.97
CLK4-209ENST00000521621 FAM20CQ8IXL6 584 aa9□□□□□ -0.97
CLK4-209ENST00000521621 TMEM151AQ8N4L1 468 aa9□□□□□ -0.97
CLK4-209ENST00000521621 TMEM102Q8N9M5 508 aaPredicted RBP9□□□□□ -0.97
CLK4-209ENST00000521621 NXNL1Q96CM4 212 aa9□□□□□ -0.97
CLK4-209ENST00000521621 OR1F2PQ96R84 312 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SPSB2Q99619 263 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SYNPO2LQ9H987 977 aa9□□□□□ -0.97
CLK4-209ENST00000521621 IFT80Q9P2H3 777 aaPredicted RBP9□□□□□ -0.97
CLK4-209ENST00000521621 SLC22A14Q9Y267 594 aa9□□□□□ -0.97
CLK4-209ENST00000521621 STK38LQ9Y2H1 464 aa9□□□□□ -0.97
CLK4-209ENST00000521621 KLHL20Q9Y2M5 609 aa9□□□□□ -0.97
CLK4-209ENST00000521621 MAP4K5Q9Y4K4 846 aa9□□□□□ -0.97
CLK4-209ENST00000521621 KCNMB2Q9Y691 235 aa9□□□□□ -0.97
CLK4-209ENST00000521621 BLACEA4D250 179 aa9□□□□□ -0.97
CLK4-209ENST00000521621 H3BQF6 201 aa9□□□□□ -0.97
CLK4-209ENST00000521621 CTSBP07858 339 aa9□□□□□ -0.97
CLK4-209ENST00000521621 EPORP19235 508 aa9□□□□□ -0.97
CLK4-209ENST00000521621 MMP11P24347 488 aa9□□□□□ -0.97
CLK4-209ENST00000521621 KCNC1P48547 511 aa9□□□□□ -0.97
CLK4-209ENST00000521621 YBX1P67809 324 aaKnown RBP9□□□□□ -0.97
CLK4-209ENST00000521621 MEF2AQ02078 507 aaPredicted RBP9□□□□□ -0.97
CLK4-209ENST00000521621 ZNF33BQ06732 778 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
CLK4-209ENST00000521621 NKG7Q16617 165 aa9□□□□□ -0.97
CLK4-209ENST00000521621 SOWAHCQ53LP3 525 aaPredicted RBP9□□□□□ -0.97
CLK4-209ENST00000521621 L3MBTL4Q8NA19 623 aa9□□□□□ -0.97
CLK4-209ENST00000521621 PKNOX2Q96KN3 472 aa9□□□□□ -0.97
CLK4-209ENST00000521621 EGFL8Q99944 293 aa9□□□□□ -0.97
CLK4-209ENST00000521621 DRC3Q9H069 523 aa9□□□□□ -0.97
CLK4-209ENST00000521621 WWOXQ9NZC7 414 aa9□□□□□ -0.97
CLK4-209ENST00000521621 ZNF282Q9UDV7 671 aaPredicted RBP9□□□□□ -0.97
CLK4-209ENST00000521621 LGALS13Q9UHV8 139 aa9□□□□□ -0.97
CLK4-209ENST00000521621 P2RX6O15547 441 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 KATNA1O75449 491 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 SCELO95171 688 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 MED26O95402 600 aa8.99□□□□□ -0.97
CLK4-209ENST00000521621 MYBL2P10244 700 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms