RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CLEC18AA5D8T8 446 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 IDSB3KWA1 339 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 H0YIG0 161 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 ALOX12BO75342 701 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 HPP00738 406 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 CDH1P12830 882 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 SAT1P21673 171 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 GRK3P35626 688 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 AVPR1BP47901 424 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 SNRPNP63162 240 aaKnown RBP16.18■□□□□ 0.18
SQLE-205ENST00000521232 C2orf54Q08AI8 447 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 INPP5JQ15735 1006 aaPredicted RBP16.18■□□□□ 0.18
SQLE-205ENST00000521232 PPP1R3AQ16821 1122 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 PLEKHN1Q494U1 663 aaPredicted RBP16.18■□□□□ 0.18
SQLE-205ENST00000521232 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
SQLE-205ENST00000521232 IGFL2Q6UWQ7 119 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 CLEC18BQ6UXF7 455 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 PARP9Q8IXQ6 854 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 EFCAB3Q8N7B9 438 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 CAMKVQ8NCB2 501 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 CLEC18CQ8NCF0 446 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 GALNT11Q8NCW6 608 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 TM9SF4Q92544 642 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 PYCR2Q96C36 320 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 OR4K3Q96R72 315 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 LHPPQ9H008 270 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 RHOJQ9H4E5 214 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
SQLE-205ENST00000521232 SAYSD1Q9NPB0 183 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 B3GNT3Q9Y2A9 372 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 ESPL1Q14674 2120 aa16.18■□□□□ 0.18
SQLE-205ENST00000521232 FFAR3O14843 346 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 PCDH17O14917 1159 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 GPR42O15529 346 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 VPS4BO75351 444 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 NSA2O95478 260 aaKnown RBP16.17■□□□□ 0.18
SQLE-205ENST00000521232 GUCA1CO95843 209 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 ACPPP15309 386 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
SQLE-205ENST00000521232 SSTR1P30872 391 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 BCL6P41182 706 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 CCR8P51685 355 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 Q0VFX4 171 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 SYT16Q17RD7 645 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 AGAP7PQ5VUJ5 663 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 NDUFAF7Q7L592 441 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 ASPGQ86U10 573 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 CEP97Q8IW35 865 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 ZADH2Q8N4Q0 377 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 MFSD9Q8NBP5 474 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 OR9A4Q8NGU2 314 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 SLC13A3Q8WWT9 602 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 C8orf44Q96CB5 159 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 AGAP4Q96P64 663 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 MACROD1Q9BQ69 325 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 POPDC3Q9HBV1 291 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 VPS4AQ9UN37 437 aa16.17■□□□□ 0.18
SQLE-205ENST00000521232 CDC7O00311 574 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 MAP2K7O14733 419 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 BMP10O95393 424 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 STATHP02808 62 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 HEXBP07686 556 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 CXCR2P25025 360 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 MAT1AQ00266 395 aaKnown RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 CDKL1Q00532 357 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 POU4F1Q01851 419 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 UBAP2LQ14157 1087 aaKnown RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 ZNF460Q14592 562 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 TMEM205Q6UW68 189 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 Q6ZS92 163 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 CAPN12Q6ZSI9 719 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 C3orf62Q6ZUJ4 267 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 PRSS41Q7RTY9 318 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 ZNF572Q7Z3I7 529 aaPredicted RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 ZC3H7AQ8IWR0 971 aaKnown RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 KCT2Q8NC54 265 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 ANKRD49Q8WVL7 239 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 THOC3Q96J01 351 aaKnown RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 PHACTR1Q9C0D0 580 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 ZNF160Q9HCG1 818 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
SQLE-205ENST00000521232 UTP11Q9Y3A2 253 aaKnown RBP16.16■□□□□ 0.18
SQLE-205ENST00000521232 LOC102723996A0A087X1L8 192 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 CXorf49A8MYA2 514 aaPredicted RBP16.15■□□□□ 0.18
SQLE-205ENST00000521232 PIAS1O75925 651 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 WISP3O95389 354 aaPredicted RBP16.15■□□□□ 0.18
SQLE-205ENST00000521232 C1QAP02745 245 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 GSTA2P09210 222 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 COX6A1P12074 109 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 CAV1Q03135 178 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 SRSF1Q07955 248 aaKnown RBP eCLIP16.15■□□□□ 0.18
SQLE-205ENST00000521232 CRB2Q5IJ48 1285 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 IRAK1BP1Q5VVH5 260 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 SLC5A11Q8WWX8 675 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 CDKL2Q92772 493 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 NEIL2Q969S2 332 aa16.15■□□□□ 0.18
SQLE-205ENST00000521232 RAB17Q9H0T7 212 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms