RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ACPTQ9BZG2 426 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 C1orf21Q9H246 121 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZDHHC6Q9H6R6 413 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 RAB9BQ9NP90 201 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 FETUBQ9UGM5 382 aa4.81□□□□□ -1.64
HMGB1P46-201ENST00000520062 IGHV4-61A0A0C4DH41 118 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 TMEM129A0AVI4 362 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 MAGEB16A2A368 324 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 CCL24O00175 119 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ACOT8O14734 319 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 IGHV4-59P01825 116 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 FRMD6-AS1P0C7T7 363 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 FGF3P11487 239 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 PLA2G2AP14555 144 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 LUMP51884 338 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 FOXG1P55316 489 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 MYL7Q01449 175 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 POU3F1Q03052 451 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC3A1Q07837 685 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ARMCX4Q5H9R4 360 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF324BQ6AW86 544 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 C9orf139Q6ZV77 190 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ERC1Q8IUD2 1116 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 TMEM126BQ8IUX1 230 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 LAX1Q8IWV1 398 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 RFLNBQ8N5W9 214 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 TMEM99Q8N816 258 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 LMNTD1Q8N9Z9 388 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF383Q8NA42 475 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 CLEC1AQ8NC01 280 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC13A3Q8WWT9 602 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 METTL21AQ8WXB1 218 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 RBM41Q96IZ5 413 aaKnown RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC39A8Q9C0K1 460 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 SHARPINQ9H0F6 387 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 HIPK2Q9H2X6 1198 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 EXOC1Q9NV70 894 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 C19orf25Q9UFG5 118 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 HOOK1Q9UJC3 728 aaKnown RBP4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 EXOC6BQ9Y2D4 811 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZNF510Q9Y2H8 683 aa4.8□□□□□ -1.64
HMGB1P46-201ENST00000520062 DHX29Q7Z478 1369 aaKnown RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 KRT87PA6NCN2 255 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 SLC22A2O15244 555 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRPSAP2O60256 369 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ACSL4O60488 711 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 CDK2AP2O75956 126 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 LETM1O95202 739 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ALPPP05187 535 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 SNHG28P0DPA3 235 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ALPPL2P10696 532 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 PCP11498 1178 aaKnown RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 DARSP14868 501 aaKnown RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 AMD1P17707 334 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 LHCGRP22888 699 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 MARK3P27448 753 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 GFPT1Q06210 699 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ABRQ12979 859 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 PDE7AQ13946 482 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 CCDC6Q16204 474 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZC2HC1CQ53FD0 456 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 WBP2NLQ6ICG8 309 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 MARVELD2Q8N4S9 558 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 KLHDC9Q8NEP7 349 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 URGCPQ8TCY9 931 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 RUNDC3BQ96NL0 473 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 DDX50Q9BQ39 737 aaKnown RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 FAM213AQ9BRX8 229 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 FSD1Q9BTV5 496 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 FAM49AQ9H0Q0 323 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 TMEM245Q9H330 911 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 RPF1Q9H9Y2 349 aaKnown RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 TAAR2Q9P1P5 351 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 TSPAN16Q9UKR8 245 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 TNNQ9UQP3 1299 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 RPH3AQ9Y2J0 694 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 R4GN57 208 aa4.79□□□□□ -1.64
HMGB1P46-201ENST00000520062 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 GRAP2O75791 330 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ATP1A1P05023 1023 aaKnown RBP4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ATP1B1P05026 303 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 MMP10P09238 476 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 AHCYP23526 432 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ITGA3P26006 1051 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 GCNT1Q02742 428 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 LCP2Q13094 533 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 P2RY6Q15077 328 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 WDR38Q5JTN6 314 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 LCN1P1Q5VSP4 162 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 NEK5Q6P3R8 708 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 B3GLCTQ6Y288 498 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 ZDHHC17Q8IUH5 632 aa4.78□□□□□ -1.64
HMGB1P46-201ENST00000520062 SAMD14Q8IZD0 417 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms