RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 LGR4Q9BXB1 951 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 POLR2J3Q9H1A7 115 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MMP27Q9H306 513 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 RPS10P5Q9NQ39 176 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 NUFIP1Q9UHK0 495 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 CABIN1Q9Y6J0 2220 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 BRCC3P46736 316 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 FKBP1AP62942 108 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MINDY4Q4G0A6 757 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ZDHHC24Q6UX98 284 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 WASH2PQ6VEQ5 465 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 IFT27Q9BW83 186 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LRCH4O75427 683 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PKMP14618 531 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SEC13P55735 322 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PIGGQ5H8A4 983 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 NOXA1Q86UR1 476 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LNX2Q8N448 690 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 BEND7Q8N7W2 519 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LIN37Q96GY3 246 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ROBO1Q9Y6N7 1651 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 OR4Q2P0C623 313 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 NT5EP21589 574 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 GRM5P41594 1212 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ATXN1P54253 815 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PPP1R3AQ16821 1122 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SYVN1Q86TM6 617 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SNX27Q96L92 541 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 HNRNPABQ99729 332 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ARPC5LQ9BPX5 153 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 GATBO75879 557 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 RPIAP49247 311 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 NDUFV1P49821 464 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PPP3R1P63098 170 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ABHD11Q8NFV4 315 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SCRN2Q96FV2 425 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 QRSL1Q9H0R6 528 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 KLF15Q9UIH9 416 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 OR6C75A6NL08 312 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 RHBDL3P58872 404 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 NCS1P62166 190 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 CLVS2Q5SYC1 327 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 FAM182AQ5T1J6 154 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PIWIL3Q7Z3Z3 882 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TBC1D15Q8TC07 691 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 FUNDC2Q9BWH2 189 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SDCBP2Q9H190 292 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 OR2S2Q9NQN1 319 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TMEM45AQ9NWC5 275 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ZNF208O43345 1280 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SPDEFO95238 335 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LYPLA2O95372 231 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 EPHX1P07099 455 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 IL12BP29460 328 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MLLT10P55197 1068 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TNFAIP8L2Q6P589 184 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 CERS5Q8N5B7 392 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 STK35Q8TDR2 534 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TTTY10Q9BZA0 68 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MEAF6Q9HAF1 191 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MS4A12Q9NXJ0 267 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 LAMA4Q16363 1823 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 SAP18O00422 153 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 GMDSO60547 372 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 MAFKO60675 156 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ATXN7L2Q5T6C5 722 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 KCT2Q8NC54 265 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TRUB1Q8WWH5 349 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PRR11Q96HE9 360 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TLL1O43897 1013 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 RPS17P08708 135 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 ARCN1P48444 511 aaKnown RBP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 CLCNKBP51801 687 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 TARDBPQ13148 414 aaKnown RBP eCLIP8.47□□□□□ -1.05
CSMD1-206ENST00000520002 PHB2Q99623 299 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 COLEC10Q9Y6Z7 277 aa8.47□□□□□ -1.05
CSMD1-206ENST00000520002 KMOO15229 486 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 DIRAS1O95057 198 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 IFNA17P01571 189 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 RD3LP0DJH9 198 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 SSTR2P30874 369 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 AVPR1BP47901 424 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 GLUD2P49448 558 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 GK2Q14410 553 aaPredicted RBP8.46□□□□□ -1.05
CSMD1-206ENST00000520002 OR52E8Q6IFG1 317 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 TCF7L1Q9HCS4 588 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 SLAMF7Q9NQ25 335 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 CTPS2Q9NRF8 586 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 M6PRP20645 277 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 TUSC3Q13454 348 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 BCL2L15Q5TBC7 163 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 TDRPQ86YL5 185 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 COL1A2P08123 1366 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 TRBV23OR9-2A0A075B6M9 112 aa8.46□□□□□ -1.05
CSMD1-206ENST00000520002 TACR2P21452 398 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms