RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 KDELC1Q6UW63 502 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 PRSS55Q6UWB4 352 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 RHOUQ7L0Q8 258 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 RTL10Q7L3V2 364 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 KRT74Q7RTS7 529 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 BCDIN3DQ7Z5W3 292 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TMEM135Q86UB9 458 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 ULK2Q8IYT8 1036 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 RNF168Q8IYW5 571 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 LRRC43Q8N309 656 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 ARHGAP18Q8N392 663 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 CPXM2Q8N436 756 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SCAIQ8N9R8 606 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TERB1Q8NA31 727 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 CCDC63Q8NA47 563 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TMEM116Q8NCL8 245 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 C11orf65Q8NCR3 313 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SETD9Q8NE22 299 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 DNAAF1Q8NEP3 725 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SPATA22Q8NHS9 363 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 FAM110DQ8TAY7 271 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 ACMSDQ8TDX5 336 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 IGSF8Q969P0 613 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 AZIN2Q96A70 460 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 CERS2Q96G23 380 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 RADILQ96JH8 1075 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SPATA17Q96L03 361 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 C8orf49Q96NF6 230 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 PLEKHG4BQ96PX9 1271 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 FCRL5Q96RD9 977 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 VAT1Q99536 393 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SEPT5Q99719 369 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TBL1YQ9BQ87 522 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 FERMT1Q9BQL6 677 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TMEM175Q9BSA9 504 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 NAT9Q9BTE0 207 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 FICDQ9BVA6 458 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 MRPL9Q9BYD2 267 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 PITPNM3Q9BZ71 974 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 FBXO44Q9H4M3 255 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 CATSPERBQ9H7T0 1116 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 ECT2Q9H8V3 914 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 LRRC40Q9H9A6 602 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 LRIT1Q9P2V4 623 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 MTRRQ9UBK8 725 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 SLCO3A1Q9UIG8 710 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 MKLN1Q9UL63 735 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 DHDHQ9UQ10 334 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 PLLPQ9Y342 182 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TRIM17Q9Y577 477 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 TTC3P53804 2025 aa4.72□□□□□ -1.65
CTNNA1-212ENST00000518919 NYNRINQ9P2P1 1898 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 OR6C68A6NDL8 312 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TTC36A6NLP5 189 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MYO1GB0I1T2 1018 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 K7ESM1 405 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KLF11O14901 512 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MATN3O15232 486 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 PLIN3O60664 434 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SNNO75324 88 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MT-CYBP00156 380 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MT-CO3P00414 261 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ADAP00813 363 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 BPGMP07738 259 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MMP2P08253 660 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CLTBP09497 229 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CCNB1P14635 433 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 IL11P20809 199 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 YWHAQP27348 245 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 NMBRP28336 390 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 GCH1P30793 250 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 EIF2DP41214 584 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CSE1LP55060 971 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CCL23P55773 120 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 RPL10AP62906 217 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KCNJ2P63252 427 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CYP4F2P78329 520 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 BST1Q10588 318 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CDH17Q12864 832 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 OVGP1Q12889 678 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TAF10Q12962 218 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 IHHQ14623 411 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KPNB1Q14974 876 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 PCLAFQ15004 111 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 LARS2Q15031 903 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CHI3L2Q15782 390 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ANXA2RQ3ZCQ2 193 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TTC31Q49AM3 519 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SPDYAQ5MJ70 313 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 C10orf120Q5SQS8 335 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 N4BP2L1Q5TBK1 243 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KLHL35Q6PF15 583 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 DHRS13Q6UX07 377 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms