RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 POM121BA6NF01 834 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 E7EVH7 732 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZBTB43O43298 467 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 SERF1AO75920 110 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 DUSP14O95147 198 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PCCAP05165 728 aaPredicted RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 CISD3P0C7P0 127 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PRKAR1AP10644 381 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 RPL17P18621 184 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 HNF1AP20823 631 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 CSRP1P21291 193 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 CCNCP24863 283 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 TGFBR1P36897 503 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 GPD2P43304 727 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 LHX2P50458 406 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PPIDQ08752 370 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PPP2R5BQ15173 497 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 IRF4Q15306 451 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PTPN14Q15678 1187 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 C17orf58Q2M2W7 97 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 CCDC144BQ3MJ40 725 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ARMCX4Q5H9R4 360 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 C2orf66Q6UXQ4 117 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 UNC5DQ6UXZ4 953 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 MCM10Q7L590 875 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 CCDC33Q8N5R6 958 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 Q8N9W7 124 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 OR13J1Q8NGT2 312 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 HM13Q8TCT9 377 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 RNF128Q8TEB7 428 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 HTRA1Q92743 480 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 TBC1D20Q96BZ9 403 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 AIFM3Q96NN9 605 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PRPF18Q99633 342 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 FOXC2Q99958 501 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ST6GALNAC5Q9BVH7 336 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 SIL1Q9H173 461 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ELAC1Q9H777 363 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 PIGVQ9NUD9 493 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 DPP3Q9NY33 737 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 SLC2A8Q9NY64 477 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ANKRD6Q9Y2G4 727 aa-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 YTHDF2Q9Y5A9 579 aaKnown RBP-1.47□□□□□ -2.64
RNU6-539P-201ENST00000516665 ZFC3H1O60293 1989 aaKnown RBP-1.47□□□□□ -2.65
RNU6-539P-201ENST00000516665 SRRM2Q9UQ35 2752 aaKnown RBP-1.47□□□□□ -2.65
RNU6-539P-201ENST00000516665 FRMD3A2A2Y4 597 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 J3QR06 171 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 GOLIM4O00461 696 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 BAIAP3O94812 1187 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ADRA2CP18825 462 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 SPRP35270 261 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 CTRLP40313 264 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 CCR6P51684 374 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 MFAP1P55081 439 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 AMPD3Q01432 767 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 PNRC1Q12796 327 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TAF10Q12962 218 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 RNPS1Q15287 305 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 RPS6KA2Q15349 733 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 HIST2H2ACQ16777 129 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 KNOP1Q1ED39 458 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF789Q5FWF6 425 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TXNDC8Q6A555 127 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 SPNS3Q6ZMD2 512 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 GCNT7Q6ZNI0 430 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 IL17RELQ6ZVW7 336 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TXLNBQ8N3L3 684 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TSPYL6Q8N831 410 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM156AQ8NDB6 213 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR8K5Q8NH50 307 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF502Q8TBZ5 544 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 MARC2Q969Z3 335 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TIFAQ96CG3 184 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM173AQ9BQD7 235 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 NRIP2Q9BQI9 281 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 URM1Q9BTM9 101 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 EIF2AQ9BY44 585 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ASPSCR1Q9BZE9 553 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 FAM49AQ9H0Q0 323 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ZNF442Q9H7R0 627 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 DDX21Q9NR30 783 aaKnown RBP eCLIP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 DEPPQ9NTK1 212 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TMLHEQ9NVH6 421 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 TRMT1Q9NXH9 659 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 COPG2Q9UBF2 871 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 DHCR7Q9UBM7 475 aaKnown RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 HAO1Q9UJM8 370 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 C19orf53Q9UNZ5 99 aaPredicted RBP-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 ARID2Q68CP9 1835 aa-1.48□□□□□ -2.65
RNU6-539P-201ENST00000516665 A0A0A6YYC8 382 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 IGKV1-8A0A0C4DH67 115 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 TRBV4-1A0A0J9YWV2 114 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 ELOVL7A1L3X0 281 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 A8MUU9 505 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 B9A039 149 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 I3L1I5 382 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 APOL1O14791 398 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 LETM1O95202 739 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 OR6A2O95222 327 aa-1.49□□□□□ -2.65
RNU6-539P-201ENST00000516665 CD4P01730 458 aa-1.49□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms