RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 NUDCQ9Y266 331 aa2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 ZNF510Q9Y2H8 683 aa2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 TMED5Q9Y3A6 229 aa2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 LOXL2Q9Y4K0 774 aa2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 DUSP10Q9Y6W6 482 aa2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.59□□□□□ -1.99
SCARNA17.1-201ENST00000516211 POLR2AP24928 1970 aaKnown RBP2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 PFASO15067 1338 aa2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 KIF16BQ96L93 1317 aa2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 COL5A3P25940 1745 aaPredicted RBP2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 LTN1O94822 1766 aa2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 PIK3C2GO75747 1445 aa2.59□□□□□ -2
SCARNA17.1-201ENST00000516211 DNHD1Q96M86 4753 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 TRAV24A0A0B4J272 114 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 EME2A4GXA9 379 aaPredicted RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 LRRIQ4A6NIV6 560 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 C2CD4BA6NLJ0 364 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 C2orf81A6NN90 581 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM25EA8MYX2 175 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 H3BMM5 538 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC28A1O00337 649 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 VWA5AO00534 786 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF197O14709 1029 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 WNT9BO14905 357 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ANKRD28O15084 1053 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SNX3O60493 162 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 GMNNO75496 209 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 LDLRP01130 860 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 IGHV2-70P01814 119 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 H1F0P07305 194 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 UGT1A1P22309 533 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 HLA-FP30511 346 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 GDI1P31150 447 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 HNRNPH1P31943 449 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 OTX2P32243 289 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PIGAP37287 484 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 EIF2S3P41091 472 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 MTIF2P46199 727 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 RPL21P46778 160 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CNN1P51911 297 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 NUDT6P53370 316 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 GSDMDP57764 484 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CD81P60033 236 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 HNRNPKP61978 463 aaKnown RBP eCLIP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CCZ1BP86790 482 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CCZ1P86791 482 aaPredicted RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PMP22Q01453 160 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 GCNT1Q02742 428 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 HSF2Q03933 536 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 MBTD1Q05BQ5 628 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC3A1Q07837 685 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 KIF5AQ12840 1032 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 IL24Q13007 206 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SPP2Q13103 211 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CUL2Q13617 745 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PKP1Q13835 747 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 KRT31Q15323 416 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 NPTX1Q15818 432 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PTGISQ16647 500 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 EIF2S3LQ2VIR3 472 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CTU2Q2VPK5 515 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 MCMDC2Q4G0Z9 681 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 LACTB2Q53H82 288 aaPredicted RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 TMEM41BQ5BJD5 291 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 EARS2Q5JPH6 523 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ELFN2Q5R3F8 820 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SPATA46Q5T0L3 261 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 STRIP1Q5VSL9 837 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 AGAP6Q5VW22 663 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 LCN10Q6JVE6 187 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 UGT3A1Q6NUS8 523 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ANGPTL8Q6UXH0 198 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF813Q6ZN06 617 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF793Q6ZN11 406 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 MON1BQ7L1V2 547 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC16A9Q7RTY1 509 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 NANOGNBQ7Z5D8 188 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 VASH2Q86V25 355 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 LUZP1Q86V48 1076 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 AMZ2Q86W34 360 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ZC3HC1Q86WB0 502 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ADGRG3Q86Y34 549 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CROCCP3Q8IVE0 287 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PCDH20Q8N6Y1 951 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 RNF148Q8N7C7 305 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 RASGEF1AQ8N9B8 481 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM133AQ8N9E0 248 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 BANPQ8N9N5 519 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 MIGA1Q8NAN2 632 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 NOA1Q8NC60 698 aaKnown RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM71CQ8NEG0 241 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF397Q8NF99 534 aaPredicted RBP2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 OR52M1Q8NGK5 317 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 OR13C2Q8NGS9 318 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ARRDC2Q8TBH0 407 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 ELP5Q8TE02 316 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 OIT3Q8WWZ8 545 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 CASP10Q92851 521 aa2.58□□□□□ -2
SCARNA17.1-201ENST00000516211 PINX1Q96BK5 328 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms