RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 FEN1P39748 380 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 MAGEA11P43364 429 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 BDKRB1P46663 353 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 PREPP48147 710 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 RING1Q06587 406 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 MPPE1Q53F39 396 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 DUS1LQ6P1R4 473 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 TMEM220Q6QAJ8 160 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 BEND5Q7L4P6 421 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 TSPAN33Q86UF1 283 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SLC38A4Q969I6 547 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 AP2M1Q96CW1 435 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 OMA1Q96E52 524 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 CMTM7Q96FZ5 175 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 RBM38Q9H0Z9 239 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 ZBTB20Q9HC78 741 aaPredicted RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 PRDM8Q9NQV8 689 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 MRPS23Q9Y3D9 190 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 KIAA1217Q5T5P2 1943 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 FKTNO75072 461 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 ATG13O75143 517 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 LAG3P18627 525 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 LRRC70Q7Z2Q7 622 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 THOC6Q86W42 341 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 AQP11Q8NBQ7 271 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 HMGCLL1Q8TB92 370 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SCAMP4Q969E2 229 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 OR51B5Q9H339 312 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SERHL2Q9H4I8 314 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SERHLQ9NQF3 203 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 DCAF13Q9NV06 445 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 PTGFRNQ9P2B2 879 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 TRPS1Q9UHF7 1281 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 UTS2RQ9UKP6 389 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 ABCG2Q9UNQ0 655 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 Q9Y3F1 56 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 WNT9AO14904 365 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 PSIP1O75475 530 aaKnown RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 GADD45AP24522 165 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 CCND3P30281 292 aaPredicted RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 MEF2AQ02078 507 aaPredicted RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 COX10Q12887 443 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 TARDBPQ13148 414 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■□□□ 12.4
SMG7-215ENST00000515829 CRHR2Q13324 411 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 ZNF366Q8N895 744 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 SCLYQ96I15 445 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 FEVQ99581 238 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 EQTNQ9NQ60 294 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 TIGARQ9NQ88 270 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 ERVK13-1Q9NX77 482 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 ZNF282Q9UDV7 671 aaPredicted RBP9.91□□□□□ -0.82
SMG7-215ENST00000515829 FBXO10Q9UK96 956 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
SMG7-215ENST00000515829 WASH4PA8MWX3 477 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 CKMT1AP12532 417 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 HMGCLP35914 325 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 STK19P49842 368 aaPredicted RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 TUBA1BP68363 451 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 PHC1P78364 1004 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 ZSWIM7Q19AV6 140 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 XKR4Q5GH76 650 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 LDLRAD1Q5T700 205 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 Q6ZPB1 254 aaPredicted RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 TUBA1AQ71U36 451 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SLITRK2Q9H156 845 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 DNAJC27Q9NZQ0 273 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 COMMD3Q9UBI1 195 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 CLEC4AQ9UMR7 237 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SHROOM3Q8TF72 1996 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 FAM240BA0A1B0GVZ2 78 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 C6orf47O95873 294 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SELPP16109 830 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 CLDN8P56748 225 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 PTSQ03393 145 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SCN1BQ07699 218 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 IL18Q14116 193 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■□□ 17.8
SMG7-215ENST00000515829 ZNHIT3Q15649 155 aaPredicted RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 RNASE12Q5GAN4 147 aaKnown RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 FAM180BQ6P0A1 224 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 CMTM8Q8IZV2 173 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 BARD1Q99728 777 aaKnown RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 MMP27Q9H306 513 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 TBC1D14Q9P2M4 693 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 A0A1W2PRB8 838 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 FABP12A6NFH5 140 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 SERPINB7O75635 380 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 STC2O76061 302 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 DNTTP04053 509 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 MMP2P08253 660 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 ACLYP53396 1101 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 NDUFA5Q16718 116 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 MZT2BQ6NZ67 158 aa9.9□□□□□ -0.82
SMG7-215ENST00000515829 CCBE1Q6UXH8 406 aaPredicted RBP9.9□□□□□ -0.82
SMG7-215ENST00000515829 Q6ZVU0 165 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms