RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 THOC6Q86W42 341 aaKnown RBP10.92□□□□□ -0.66
VCAN-212ENST00000515397 AMER3Q8N944 861 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 UHMK1Q8TAS1 419 aaKnown RBP10.92□□□□□ -0.66
VCAN-212ENST00000515397 SLC13A3Q8WWT9 602 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 CDKL2Q92772 493 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 EXT2Q93063 718 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 NEIL2Q969S2 332 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 FKBP10Q96AY3 582 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 RBBP8Q99708 897 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 CPNE1Q99829 537 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 PCBD2Q9H0N5 130 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 SLC26A1Q9H2B4 701 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 MLXIPLQ9NP71 852 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 ENAMQ9NRM1 1142 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 NSMCE4AQ9NXX6 385 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 GPR83Q9NYM4 423 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 HCN3Q9P1Z3 774 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 ZNF282Q9UDV7 671 aaPredicted RBP10.92□□□□□ -0.66
VCAN-212ENST00000515397 C3orf18Q9UK00 162 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 PLAAQ9Y263 795 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 PRRC2CQ9Y520 2896 aaKnown RBP10.92□□□□□ -0.66
VCAN-212ENST00000515397 ZNF860A6NHJ4 632 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 AGPSO00116 658 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CEACAM4O75871 244 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 WISP3O95389 354 aaPredicted RBP10.91□□□□□ -0.66
VCAN-212ENST00000515397 ANXA5P08758 320 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CD63P08962 238 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 MMP11P24347 488 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 ITGA3P26006 1051 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
VCAN-212ENST00000515397 SLC26A3P40879 764 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CASRP41180 1078 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CD97P48960 835 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CCR8P51685 355 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 EMP2P54851 167 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 RRADP55042 308 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 AP1S2P56377 157 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 RPS15AP62244 130 aaKnown RBP10.91□□□□□ -0.66
VCAN-212ENST00000515397 POU4F1Q01851 419 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 Q0VFX4 171 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 DLG1Q12959 904 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CSHL1Q14406 222 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 SLMAPQ14BN4 828 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 OR4D1Q15615 310 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
VCAN-212ENST00000515397 PRMT9Q6P2P2 845 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 FRA10AC1Q70Z53 315 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 ASPGQ86U10 573 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 GALNT16Q8N428 558 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 MMGT1Q8N4V1 131 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 CLEC1AQ8NC01 280 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 ATL1Q8WXF7 558 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 FER1L6-AS2Q96M78 137 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 GPR22Q99680 433 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 HAUS8Q9BT25 410 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 DRC3Q9H069 523 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 OARD1Q9Y530 152 aa10.91□□□□□ -0.66
VCAN-212ENST00000515397 SPENQ96T58 3664 aaKnown RBP10.91□□□□□ -0.66
VCAN-212ENST00000515397 KCNE1BA0A087WTH5 132 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 IDSB3KWA1 339 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 TAPBPO15533 448 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 RDH16O75452 317 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 WDR47O94967 919 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 WISP1O95388 367 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 HEXBP07686 556 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ENO2P09104 434 aaPredicted RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 CD1DP15813 335 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 STMN1P16949 149 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 CCND1P24385 295 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 HRH2P25021 359 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 SPRP35270 261 aaPredicted RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 RELAQ04206 551 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 EEF1A2Q05639 463 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 DSG2Q14126 1118 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 RBBP5Q15291 538 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 PRR30Q53SZ7 412 aaPredicted RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 GRTP1Q5TC63 336 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 MFSD4BQ5TF39 518 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 MROH9Q5TGP6 573 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 GARNL3Q5VVW2 1013 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 RAPH1Q70E73 1250 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 CYS1Q717R9 158 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 TMPRSS11BQ86T26 416 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 PDSS2Q86YH6 399 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 GPSM1Q86YR5 675 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ZC3H7AQ8IWR0 971 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 RBMXL3Q8N7X1 1067 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 MFSD9Q8NBP5 474 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ABHD11Q8NFV4 315 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 OR11G2Q8NGC1 345 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 OR5T3Q8NGG3 340 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 SLC5A11Q8WWX8 675 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 RHBDF1Q96CC6 855 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 TM4SF19Q96DZ7 209 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 RBCK1Q9BYM8 510 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 DERL2Q9GZP9 239 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 KLHL31Q9H511 634 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ALG9Q9H6U8 611 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ZNF552Q9H707 407 aaPredicted RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 WDR54Q9H977 334 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms