RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SP1P08047 785 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 HOXD4P09016 255 aaPredicted RBP13.13□□□□□ -0.31
SPCS3-204ENST00000513139 MSX1P28360 303 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 CHRNB4P30926 498 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 CCNFP41002 786 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 PPP2R2AP63151 447 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 RELAQ04206 551 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 FOLH1Q04609 750 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 KLF1Q13351 362 aaPredicted RBP13.13□□□□□ -0.31
SPCS3-204ENST00000513139 EXT1Q16394 746 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 HKDC1Q2TB90 917 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 GALNTL5Q7Z4T8 443 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.13□□□□□ -0.31
SPCS3-204ENST00000513139 CRLF3Q8IUI8 442 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 LGI4Q8N135 537 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 M1APQ8TC57 530 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 OSBPL9Q96SU4 736 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 OLFM1Q99784 485 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 VN1R1Q9GZP7 353 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 RIMKLBQ9ULI2 386 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 TTC7AQ9ULT0 858 aaPredicted RBP13.13□□□□□ -0.31
SPCS3-204ENST00000513139 VPS13CQ709C8 3753 aa13.13□□□□□ -0.31
SPCS3-204ENST00000513139 TMEM200CA6NKL6 621 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 KPNA5O15131 536 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 PSMD3O43242 534 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 NEURL1O76050 574 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 PKMP14618 531 aaKnown RBP13.12□□□□□ -0.31
SPCS3-204ENST00000513139 ZNF24P17028 368 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 AGTR2P50052 363 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 HSF1Q00613 529 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 FASTKQ14296 549 aaKnown RBP13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SYT16Q17RD7 645 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SLC25A25Q6KCM7 469 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 AFTPHQ6ULP2 937 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 TAB3Q8N5C8 712 aaPredicted RBP13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SLC5A8Q8N695 610 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 FAM57AQ8TBR7 257 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 HDAC10Q969S8 669 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 RERGQ96A58 199 aaPredicted RBP13.12□□□□□ -0.31
SPCS3-204ENST00000513139 OR2A5Q96R48 311 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 NPAS2Q99743 824 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 UTP6Q9NYH9 597 aaKnown RBP13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
SPCS3-204ENST00000513139 A0A0A6YYC8 382 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 CTAGE9A4FU28 777 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 H0YIG0 161 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 I3L1I5 382 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 TOXO94900 526 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 FGGP02679 453 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PTGS2P35354 604 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 AVPR1BP47901 424 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 OC90Q02509 493 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PTK6Q13882 451 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 SIX1Q15475 284 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 P3H1Q32P28 736 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 LANCL3Q6ZV70 420 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PAQR7Q86WK9 346 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 OR4L1Q8NH43 312 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PBKQ96KB5 322 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 C16orf45Q96MC5 204 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 PANX3Q96QZ0 392 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 MRPS30Q9NP92 439 aaKnown RBP13.11□□□□□ -0.31
SPCS3-204ENST00000513139 DLL4Q9NR61 685 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 NFS1Q9Y697 457 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
SPCS3-204ENST00000513139 GABRR3A8MPY1 467 aa13.1□□□□□ -0.31
SPCS3-204ENST00000513139 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
SPCS3-204ENST00000513139 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms