RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 F8W8V4 182 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 PHF2O75151 1096 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 SUN1O94901 812 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 MATN4O95460 622 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 IL1RNP18510 177 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 TPP2P29144 1249 aaPredicted RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 CTNNA1P35221 906 aaKnown RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 CCNFP41002 786 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 FOLH1Q04609 750 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 MYBPHQ13203 477 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 TSTA3Q13630 321 aaPredicted RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 GBX1Q14549 363 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 EXT1Q16394 746 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 FASTKD1Q53R41 847 aaKnown RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 CTSL3PQ5NE16 218 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 CES4AQ5XG92 561 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 ICE2Q659A1 982 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 OR9A1PQ8NGU1 263 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 ALG3Q92685 438 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 NINJ1Q92982 152 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 TTC1Q99614 292 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 RBCK1Q9BYM8 510 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 KCNJ16Q9NPI9 418 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 ZNHIT6Q9NWK9 470 aaKnown RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 DNAJB12Q9NXW2 375 aaKnown RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 C19orf25Q9UFG5 118 aaPredicted RBP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 ST6GALNAC2Q9UJ37 374 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 PCDHA3Q9Y5H8 950 aa17.86■□□□□ 0.45
HMGCS1-206ENST00000511774 COL6A5A8TX70 2615 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 SGK494L7N484 410 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 HS6ST1O60243 411 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 MFAP3LO75121 409 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 NSA2O95478 260 aaKnown RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 EZRP15311 586 aaKnown RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RPA3P35244 121 aaPredicted RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 AVPR1BP47901 424 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 NUP107P57740 925 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RHAGQ02094 409 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 LTBQ06643 244 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 PRDX1Q06830 199 aaKnown RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 USP10Q14694 798 aaKnown RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 NAA25Q14CX7 972 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 PTRHD1Q6GMV3 140 aaKnown RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RTTNQ86VV8 2226 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 PDSS2Q86YH6 399 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 EID3Q8N140 333 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RAB42Q8N4Z0 105 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 SLC5A8Q8N695 610 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RERGQ96A58 199 aaPredicted RBP17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 FAM136AQ96C01 138 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 GALPQ9UBC7 116 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 RIMKLBQ9ULI2 386 aa17.85■□□□□ 0.45
HMGCS1-206ENST00000511774 TLN2Q9Y4G6 2542 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 H0YIG0 161 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 NDC80O14777 642 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 KLK8O60259 260 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 CDC40O60508 579 aaKnown RBP eCLIP17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 CTAG2O75638 210 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 ZWINTO95229 277 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 CYC1P08574 325 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 TFEBP19484 476 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 MEOX1P50221 254 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 SLC26A5P58743 744 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 ADAM8P78325 824 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 PMPCAQ10713 525 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 CDH17Q12864 832 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 PTK6Q13882 451 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 OTOAQ7RTW8 1153 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 RPS19BP1Q86WX3 136 aaKnown RBP17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 ELP5Q8TE02 316 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 RND1Q92730 232 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 PKP4Q99569 1192 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 TRIM45Q9H8W5 580 aaPredicted RBP17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 PLSCR2Q9NRY7 297 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 LANCL2Q9NS86 450 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 CATSPERZQ9NTU4 200 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 PLEKHA6Q9Y2H5 1048 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 L3MBTL1Q9Y468 752 aa17.84■□□□□ 0.45
HMGCS1-206ENST00000511774 MYO1CO00159 1063 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 TFECO14948 347 aaPredicted RBP17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 PROM1O43490 865 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 RDH16O75452 317 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 CDC123O75794 336 aaPredicted RBP17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 BCL6P41182 706 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 AGTR2P50052 363 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 ITGA8P53708 1063 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 TPM4P67936 248 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 PRAMEP78395 509 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 RELAQ04206 551 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 SNTB1Q13884 538 aaKnown RBP17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 ABRAXAS2Q15018 415 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 TMEM211Q6ICI0 200 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 SULF2Q8IWU5 870 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 LGI4Q8N135 537 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 HORMAD2Q8N7B1 307 aa17.83■□□□□ 0.44
HMGCS1-206ENST00000511774 OR52N2Q8NGI0 321 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms