RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CHFRQ96EP1 664 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZBED6CLQ96FA7 236 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF354BQ96LW1 612 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 HBEGFQ99075 208 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 FTHL17Q9BXU8 183 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZDHHC6Q9H6R6 413 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 AGPAT4Q9NRZ5 378 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 AIG1Q9NVV5 245 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MYH8P13535 1937 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 DIP2CQ9Y2E4 1556 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SULT1C2O00338 296 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 IFNA17P01571 189 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ALDH2P05091 517 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF3P17036 446 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ACVR2AP27037 513 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 EVI2BP34910 448 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ALDH3B2P48448 385 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CDK6Q00534 326 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 NAPRTQ6XQN6 538 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GALNT13Q8IUC8 556 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TXNDC5Q8NBS9 432 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR8J1Q8NGP2 316 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 IL31RAQ8NI17 732 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC9A6Q92581 669 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CCDC120Q96HB5 630 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR4K3Q96R72 315 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TWNKQ96RR1 684 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC35A5Q9BS91 424 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 FN3KQ9H479 309 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PCDHGB2Q9Y5G2 931 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 COL1A2P08123 1366 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ATRNL1Q5VV63 1379 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MYH7BA7E2Y1 1941 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 A0A1W2PRB8 838 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TMEM221A6NGB7 291 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 XKRYO14609 159 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 RAB3BP20337 219 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 KCNC4Q03721 635 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SNTB2Q13425 540 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PLEKHN1Q494U1 663 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PAQR3Q6TCH7 311 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR10H5Q8NGA6 315 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR8K3Q8NH51 312 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TMEM169Q96HH4 297 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CLCC1Q96S66 551 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CIPCQ9C0C6 399 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR51V1Q9H2C8 321 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 LYARQ9NX58 379 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 VPS29Q9UBQ0 182 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CLDN5O00501 218 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 RCBTB2O95199 551 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 POMCP01189 267 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ALPPP05187 535 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TRAPPC2P0DI81 140 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TRAPPC2BP0DI82 140 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 KCNA5P22460 613 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PDHA2P29803 388 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GK3PQ14409 553 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 FBXO48Q5FWF7 155 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR4F3Q6IEY1 312 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PGAP1Q75T13 922 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PIWIL3Q7Z3Z3 882 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ATAD1Q8NBU5 361 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR2L2Q8NH16 312 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CMTM7Q96FZ5 175 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MCCC1Q96RQ3 725 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 NELL2Q99435 816 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 C7orf50Q9BRJ6 194 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 DHRS4Q9BTZ2 278 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CACNG6Q9BXT2 260 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MAGEH1Q9H213 219 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 RETREG1Q9H6L5 497 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TPT1P8Q9HAU6 139 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 FARSAQ9Y285 508 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 OR10H1Q9Y4A9 318 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 N6AMT1Q9Y5N5 214 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CPSF4LA6NMK7 179 aaKnown RBP7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 MANBAO00462 879 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 B4GALT5O43286 388 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 ATG13O75143 517 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 C1RP00736 705 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 STSP08842 583 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 TRIM23P36406 574 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 OR3A3P47888 321 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 OR3A2P47893 321 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 OGDHQ02218 1023 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 NIPAL4Q0D2K0 466 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 NAE1Q13564 534 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 CDK10Q15131 360 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 UAP1L1Q3KQV9 507 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 TECRLQ5HYJ1 363 aa7.1□□□□□ -1.27
UBE2D3-224ENST00000508474 C6orf136Q5SQH8 315 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms