RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HNRNPA1L2Q32P51 320 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZACNQ401N2 412 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TCHHL1Q5QJ38 904 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SYPL2Q5VXT5 272 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PMS2CLQ68D20 193 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GUSBP11Q6P575 273 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TUBA3EQ6PEY2 450 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 POLNQ7Z5Q5 900 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINA9Q86WD7 417 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LIX1LQ8IVB5 337 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 IL17RCQ8NAC3 791 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PAQR8Q8TEZ7 354 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 AZIN2Q96A70 460 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF707Q96C28 371 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BIRC7Q96CA5 298 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF599Q96NL3 588 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SCNM1Q9BWG6 230 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LGR4Q9BXB1 951 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DPH1Q9BZG8 443 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BRF2Q9HAW0 419 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PCDH18Q9HCL0 1135 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PILRBQ9UKJ0 227 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CFL2Q9Y281 166 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 COL4A6Q14031 1691 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MYO18AQ92614 2054 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CENPXA8MT69 81 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 METTL12A8MUP2 240 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 J3KR12 359 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 WRBO00258 174 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PFDN1O60925 122 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 REM1O75628 298 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ARHGEF15O94989 841 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 VAPBO95292 243 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RASAL1O95294 804 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CPNE6O95741 557 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CD40LGP29965 261 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC5A2P31639 672 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 UQCRC1P31930 480 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EIF2S3P41091 472 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SGSHP51688 502 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ARSFP54793 590 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PPP2R2AP63151 447 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HYAL2Q12891 473 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NFYCQ13952 458 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RAB39AQ14964 217 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC153Q494R4 210 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL26Q53HC5 615 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM74Q86UV6 250 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CHST14Q8NCH0 376 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TNFRSF25Q93038 417 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ART4Q93070 314 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RAD51AP1Q96B01 352 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C1orf74Q96LT6 269 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EPB41L1Q9H4G0 881 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SERHL2Q9H4I8 314 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C12orf10Q9HB07 376 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM165Q9HC07 324 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SERHLQ9NQF3 203 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ITM2CQ9NQX7 267 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DDX28Q9NUL7 540 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PSMC3IPQ9P2W1 217 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EBF1Q9UH73 591 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DCDC2Q9UHG0 476 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TAGLN3Q9UI15 199 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF229Q9UJW7 825 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHB10Q9UN67 800 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM184BQ9Y519 407 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KCTD3Q9Y597 815 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SCN10AQ9Y5Y9 1956 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MATN3O15232 486 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FAM20BO75063 409 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINB7O75635 380 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RSL1D1O76021 490 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KRT75O95678 551 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OAS1P00973 400 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ALDOAP04075 364 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HGFP14210 728 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TCF4P15884 667 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CCNOP22674 350 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MGAT1P26572 445 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EPHA4P54764 986 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C4orf17Q53FE4 359 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF470Q6ECI4 717 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EMBQ6PCB8 327 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LINC00696Q6ZRV3 163 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 APTXQ7Z2E3 356 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 WDR53Q7Z5U6 358 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 AMIGO1Q86WK6 493 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRAM1L1Q8N609 369 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CAMKVQ8NCB2 501 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 STYXQ8WUJ0 223 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HDAC2Q92769 488 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EZH1Q92800 747 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CPXM1Q96SM3 734 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 VN1R3Q9BXE9 311 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ST6GALNAC4Q9H4F1 302 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM39Q9HCM9 518 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TBCCD1Q9NVR7 557 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 IL19Q9UHD0 177 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RPS6KA6Q9UK32 745 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms