RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 OPN1MW2P0DN77 364 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 OPN1MW3P0DN78 364 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ACP2P11117 423 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 KRT13P13646 458 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 CCND2P30279 289 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PEX19P40855 299 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 CRKLP46109 303 aaKnown RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC9A3P48764 834 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 CASP9P55211 416 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 NME5P56597 212 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC26A5P58743 744 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 CDK3Q00526 305 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PRKCZQ05513 592 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TSTA3Q13630 321 aaPredicted RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PDK1Q15118 436 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 UGP2Q16851 508 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 AARDQ4LEZ3 155 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 LRRC73Q5JTD7 316 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 NEK5Q6P3R8 708 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TMEM110Q86TL2 294 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TLK2Q86UE8 772 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ADIPOR2Q86V24 386 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TBC1D21Q8IYX1 336 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 KDM8Q8N371 416 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 L3MBTL4Q8NA19 623 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC4A11Q8NBS3 891 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ZNF540Q8NDQ6 660 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ST7LQ8TDW4 575 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ZNF606Q8WXB4 792 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SEPT1Q8WYJ6 367 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PRCCQ92733 491 aaPredicted RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SNRNP40Q96DI7 357 aaKnown RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 GIMAP5Q96F15 307 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 C18orf12Q96KH6 178 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 ZNF582Q96NG8 517 aaPredicted RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PKP2Q99959 881 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 RTP3Q9BQQ7 232 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 CABLES2Q9BTV7 478 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 MCRIP2Q9BUT9 160 aaKnown RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 GTPBP2Q9BX10 602 aaKnown RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 SLA2Q9H6Q3 261 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 RNPEPL1Q9HAU8 725 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PLCXD1Q9NUJ7 323 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 DCAF16Q9NXF7 216 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TBC1D7Q9P0N9 293 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 TMEM181Q9P2C4 612 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 POLLQ9UGP5 575 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 PCDHGA1Q9Y5H4 931 aa3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 DDX49Q9Y6V7 483 aaKnown RBP3.36□□□□□ -1.87
CBX3P3-201ENST00000508108 RGSL1A5PLK6 1076 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SSX4O60224 188 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 PALMO75781 387 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 AKAP3O75969 853 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC16A8O95907 504 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 FRMD6-AS1P0C7T7 363 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 DANCRP0C864 163 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 FAM157CP0CG43 387 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GHRP10912 638 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 VCLP18206 1134 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 DNASE1P24855 282 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 HSD17B3P37058 310 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC6A12P48065 614 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 DSCR10P59022 87 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GAGE2BQ13066 116 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 MAPK11Q15759 364 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SGCBQ16585 318 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 CCDC40Q4G0X9 1142 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GAGE2EQ4V326 116 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 RNASEH2BQ5TBB1 312 aaKnown RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 LRRC38Q5VT99 294 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GAGE2AQ6NT46 116 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 CORO6Q6QEF8 472 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 MFSD7Q6UXD7 560 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 Q6ZSR9 355 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SLC16A9Q7RTY1 509 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 BATF2Q8N1L9 274 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 RYBPQ8N488 228 aaPredicted RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 TMEM178AQ8NBL3 297 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 PPFIBP2Q8ND30 876 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GMCL1P1Q8NEA9 526 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 NEK11Q8NG66 645 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 GRHL3Q8TE85 626 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 HEXDCQ8WVB3 486 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 RAD54LQ92698 747 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 DAZLQ92904 295 aaKnown RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 MOCOSQ96EN8 888 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 BSCL2Q96G97 398 aaPredicted RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SFXN2Q96NB2 322 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 KLHL5Q96PQ7 755 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 TRIM51Q9BSJ1 452 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 SYT11Q9BT88 431 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 TRAF4Q9BUZ4 470 aaPredicted RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 KATNB1Q9BVA0 655 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 CACNG6Q9BXT2 260 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 MINDY3Q9H8M7 445 aa3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 LIN28AQ9H9Z2 209 aaKnown RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 PRMT7Q9NVM4 692 aaPredicted RBP3.35□□□□□ -1.87
CBX3P3-201ENST00000508108 AATFQ9NY61 560 aaKnown RBP eCLIP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms