RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 LEF1Q9UJU2 399 aaPredicted RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 MAN1B1Q9UKM7 699 aa3.04□□□□□ -1.92
LSM6-205ENST00000507449 PA2G4Q9UQ80 394 aaKnown RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 RUVBL2Q9Y230 463 aaKnown RBP3.04□□□□□ -1.92
LSM6-205ENST00000507449 IL16Q14005 1332 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 IGHV4-4A0A075B6R2 117 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 A0A087WUV0 522 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 A0A0A6YYC8 382 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 ILVBLA1L0T0 632 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PRR23AA6NEV1 266 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 SDR42E2A6NKP2 422 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PRR23D1E9PI22 279 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 I3L1I5 382 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 SLC33A1O00400 549 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 ACSL4O60488 711 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 KRT33AO76009 404 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 GH1P01241 217 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 RAF1P04049 648 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 SP9P0CG40 484 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PRR23D2P0DMB1 279 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 PIK3R1P27986 724 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 SFTPDP35247 375 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 CSNK2BP67870 215 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 TRA2AQ13595 282 aaKnown RBP eCLIP3.03□□□□□ -1.92
LSM6-205ENST00000507449 TRIM29Q14134 588 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 RCN2Q14257 317 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 ZNF74Q16587 644 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 ZNF876PQ49A33 203 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 FUT10Q6P4F1 479 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 ZNF329Q86UD4 541 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 SIAH3Q8IW03 269 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 ZC3H3Q8IXZ2 948 aaKnown RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 C4orf19Q8IY42 314 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 NAT8LQ8N9F0 302 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 CNBD1Q8NA66 436 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 CTCFLQ8NI51 663 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 GATAD1Q8WUU5 269 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 AZIN2Q96A70 460 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 LITAFQ99732 161 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 ALKBH7Q9BT30 221 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 ACPTQ9BZG2 426 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 RSPH9Q9H1X1 276 aaPredicted RBP3.03□□□□□ -1.92
LSM6-205ENST00000507449 UBQLN3Q9H347 655 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 C5orf66Q9H5L9 145 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PNPLA3Q9NST1 481 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PILRBQ9UKJ0 227 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 GAB2Q9UQC2 676 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 PCDHGA1Q9Y5H4 931 aa3.03□□□□□ -1.92
LSM6-205ENST00000507449 TRAV18A0A075B6X5 111 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 A0A087WW49 117 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TRBV4-1A0A0J9YWV2 114 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 A0A1W2PR80 420 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SMIM30A4D0T7 59 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ANTXRLA6NF34 631 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 GLTPD2A6NH11 291 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ANKDD1BA6NHY2 528 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 HHLA1C9JL84 531 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 NPIPA3F8WFD2 350 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ZNF195O14628 629 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ZNF263O14978 683 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 EPHB6O15197 1021 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TEX28O15482 410 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TTI1O43156 1089 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 EXTL3O43909 919 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 VTNP04004 478 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SLC2A2P11168 524 aaPredicted RBP3.02□□□□□ -1.93
LSM6-205ENST00000507449 GOT1P17174 413 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 CYP2A7P20853 494 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 MAGEB1P43366 347 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 IER3P46695 156 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 NPBWR1P48145 328 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 CLDN17P56750 224 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 MYL7Q01449 175 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SRSF9Q13242 221 aaKnown RBP eCLIP3.02□□□□□ -1.93
LSM6-205ENST00000507449 TEAD2Q15562 447 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SMU1Q2TAY7 513 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 KBTBD12Q3ZCT8 623 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SLC39A12Q504Y0 691 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 C9orf50Q5SZB4 431 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ADAMTSL4-AS1Q5T5F5 129 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 PM20D1Q6GTS8 502 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 BHLHB9Q6PI77 547 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TMEM270Q6UE05 265 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 Q6ZSR9 355 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SLC24A5Q71RS6 500 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 KCTD9Q7L273 389 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 PRUNE1Q86TP1 453 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 ANKRD46Q86W74 232 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 CROCCP3Q8IVE0 287 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TMCO5AQ8N6Q1 288 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 GBP7Q8N8V2 638 aaPredicted RBP3.02□□□□□ -1.93
LSM6-205ENST00000507449 KIAA0895Q8NCT3 520 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SLC26A7Q8TE54 656 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 METTL21AQ8WXB1 218 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 SUSD6Q92537 303 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 LGALS12Q96DT0 336 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 LRR1Q96L50 414 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 TSSK2Q96PF2 358 aa3.02□□□□□ -1.93
LSM6-205ENST00000507449 NEDD4LQ96PU5 975 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms