RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
SQSTM1-211ENST00000506690 CCM2Q9BSQ5 444 aa16.54■□□□□ 0.24
SQSTM1-211ENST00000506690 TIGARQ9NQ88 270 aa16.54■□□□□ 0.24
SQSTM1-211ENST00000506690 DIABLOQ9NR28 239 aa16.54■□□□□ 0.24
SQSTM1-211ENST00000506690 OARD1Q9Y530 152 aa16.54■□□□□ 0.24
SQSTM1-211ENST00000506690 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 LINC00854A0A1B0GVQ3 168 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 OR6C70A6NIJ9 312 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 C12orf71A8MTZ7 269 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TLR5O60602 858 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 ARHGEF15O94989 841 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 HLA-DMAP28067 261 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 CRYBA2P53672 197 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 CRYBB1P53674 252 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TNK1Q13470 666 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 FAM214AQ32MH5 1076 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 C5orf22Q49AR2 442 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 METTL23Q86XA0 190 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 FAM20CQ8IXL6 584 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 REPS1Q96D71 796 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TPD52L3Q96J77 140 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 MAP6Q96JE9 813 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 FRMD6Q96NE9 622 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TTLL2Q9BWV7 592 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 ZNF717Q9BY31 904 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 KCNN3Q9UGI6 736 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 PADI2Q9Y2J8 665 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 GREB1Q4ZG55 1949 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 COL6A1P12109 1028 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 PRKACBP22694 351 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 OR1E1P30953 314 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 RPL9P32969 192 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 GZMKP49863 264 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 ABRQ12979 859 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 VEZF1Q14119 521 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 GLYR1Q49A26 553 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 CDONQ4KMG0 1287 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 LDLRAD1Q5T700 205 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TIGD3Q6B0B8 471 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 OVOS1Q6IE37 1185 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 TSEN54Q7Z6J9 526 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 FAM9CQ8IZT9 166 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 NELL1Q92832 810 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 MTFMTQ96DP5 389 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 DPH2Q9BQC3 489 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 CNPPD1Q9BV87 410 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 C11orf54Q9H0W9 315 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 RNF121Q9H920 327 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 KLHL21Q9UJP4 597 aa16.53■□□□□ 0.24
SQSTM1-211ENST00000506690 B8ZZF3 427 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 SHOXO15266 292 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 SDC1P18827 310 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 IL12RB1P42701 662 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 RORCP51449 518 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 PPIGQ13427 754 aaKnown RBP eCLIP16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 DUOXA1Q1HG43 343 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC35F1Q5T1Q4 408 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 NATD1Q8N6N6 113 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 OPALINQ96PE5 141 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 SLC29A3Q9BZD2 475 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 POFUT2Q9Y2G5 429 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 ACTL7AQ9Y615 435 aa16.52■□□□□ 0.24
SQSTM1-211ENST00000506690 TMEM229AB2RXF0 380 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 F2P00734 622 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 RGRP47804 291 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 KCNQ1P51787 676 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 PCDH1Q08174 1060 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 MTAPQ13126 283 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 LRRC66Q68CR7 880 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 IDO2Q6ZQW0 420 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 YIPF7Q8N8F6 280 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 UBTD2Q8WUN7 234 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 EGFL8Q99944 293 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 HHATLQ9HCP6 504 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 BPIFA1Q9NP55 256 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 RLIMQ9NVW2 624 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 CNOT2Q9NZN8 540 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 FNDC3AQ9Y2H6 1198 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 A0A1W2PQ72 361 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 H3BM21 787 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 TNFRSF11BO00300 401 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 TREHO43280 583 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 EPN2O95208 641 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 PDYNP01213 254 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 BRCC3P46736 316 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 XKRXQ6PP77 449 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 MON1AQ86VX9 555 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 SYNPOQ8N3V7 929 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 TTC16Q8NEE8 873 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 OR10G2Q8NGC3 310 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 OR4M1Q8NGD0 313 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 DEDD2Q8WXF8 326 aa16.51■□□□□ 0.23
SQSTM1-211ENST00000506690 ULK4Q96C45 1275 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms