RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TRPC4Q9UBN4 977 aa12.46□□□□□ -0.41
DDX41-204ENST00000504807 ZNF282Q9UDV7 671 aaPredicted RBP12.46□□□□□ -0.41
DDX41-204ENST00000504807 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
DDX41-204ENST00000504807 OSGIN2Q9Y236 505 aa12.46□□□□□ -0.41
DDX41-204ENST00000504807 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.41
DDX41-204ENST00000504807 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
DDX41-204ENST00000504807 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.42
DDX41-204ENST00000504807 HEATR5BQ9P2D3 2071 aa12.46□□□□□ -0.42
DDX41-204ENST00000504807 IDSB3KWA1 339 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 CES2O00748 559 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PFDN6O15212 129 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PIAS1O75925 651 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 B3GALT4O96024 378 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 CD63P08962 238 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PIM1P11309 404 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 ENO3P13929 434 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 ELK3P41970 407 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 EMP3P54852 163 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PCOLCEQ15113 449 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PPP1R7Q15435 360 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 MUM1Q2TAK8 710 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 TTLL9Q3SXZ7 439 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 TEDDM1Q5T9Z0 273 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 B3GNTL1Q67FW5 361 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 ADCK2Q7Z695 626 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 KLHL7Q8IXQ5 586 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 NACC2Q96BF6 587 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 PYCR2Q96C36 320 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 MMABQ96EY8 250 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 LINGO1Q96FE5 620 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 CERS2Q96G23 380 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 WDR77Q9BQA1 342 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 ILKAPQ9H0C8 392 aaPredicted RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 PLA2G3Q9NZ20 509 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 NXT1Q9UKK6 140 aaKnown RBP12.45□□□□□ -0.42
DDX41-204ENST00000504807 CHMP2BQ9UQN3 213 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
DDX41-204ENST00000504807 IGHV1-45A0A0A0MS14 117 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 A0A1W2PQ72 361 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 VPS26AO75436 327 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 WISP2O76076 250 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 HPP00738 406 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 F10P00742 488 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 ACPPP15309 386 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 SOX11P35716 441 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 ST13P50502 369 aaKnown RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 MEF2AQ02078 507 aaPredicted RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 RELAQ04206 551 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 HIBCHQ6NVY1 386 aaPredicted RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 AGTRAPQ6RW13 159 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 LANCL3Q6ZV70 420 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 LMNTD2Q8IXW0 634 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 ZADH2Q8N4Q0 377 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 KCT2Q8NC54 265 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 ZNF740Q8NDX6 193 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 BRIX1Q8TDN6 353 aaKnown RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 PPP4R1Q8TF05 950 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 GRK7Q8WTQ7 553 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 TM4SF19Q96DZ7 209 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 CFAP36Q96G28 342 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 SGPP1Q9BX95 441 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 LHPPQ9H008 270 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 CCDC68Q9H2F9 335 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 G3BP2Q9UN86 482 aaKnown RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 COPG1Q9Y678 874 aaKnown RBP12.44□□□□□ -0.42
DDX41-204ENST00000504807 TEX264Q9Y6I9 313 aa12.44□□□□□ -0.42
DDX41-204ENST00000504807 PKDREJQ9NTG1 2253 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 LOC102723996A0A087X1L8 192 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 TTI1O43156 1089 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ZBTB14O43829 449 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 IGHEP01854 428 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ALPPP05187 535 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 PRR35P0CG20 571 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ITGAMP11215 1152 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 CDH1P12830 882 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 COX6B1P14854 86 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 NPPBP16860 134 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 IL1RNP18510 177 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 FDXRP22570 491 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 HSD17B2P37059 387 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 GLRBP48167 497 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ITGA8P53708 1063 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 EMP2P54851 167 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 KRTAP10-9P60411 292 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ABATP80404 500 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 OCA2Q04671 838 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 NAE1Q13564 534 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ZNF460Q14592 562 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 SPANXN3Q5MJ09 141 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 HECTD2Q5U5R9 776 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 AGAP7PQ5VUJ5 663 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 STEAP4Q687X5 459 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 TMEM214Q6NUQ4 689 aaKnown RBP12.43□□□□□ -0.42
DDX41-204ENST00000504807 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms