RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 ZNF425Q6IV72 752 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 PAPD4Q6PIY7 484 aaKnown RBP13.28□□□□□ -0.28
PAAF1-204ENST00000504441 LRRC6Q86X45 466 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 EID3Q8N140 333 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 CPSF7Q8N684 471 aaKnown RBP13.28□□□□□ -0.28
PAAF1-204ENST00000504441 SLC5A8Q8N695 610 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 ZCCHC10Q8TBK6 192 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 MCOLN3Q8TDD5 553 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 NRGNQ92686 78 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 RAB6BQ9NRW1 208 aa13.28□□□□□ -0.28
PAAF1-204ENST00000504441 FAM90A27PA6NNH2 459 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 H0YIG0 161 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 H7BY64 318 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 MYO1CO00159 1063 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 SMAPO00193 183 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 SLC25A12O75746 678 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 NEURL1O76050 574 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 SLC16A8O95907 504 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 TPOP07202 933 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ERGP11308 486 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 CD99P14209 185 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ETS1P14921 441 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 FDFT1P37268 417 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 AGTR2P50052 363 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 TAS2R50P59544 299 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 PTK6Q13882 451 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 KLHL38Q2WGJ6 581 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ACSBG2Q5FVE4 666 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 PCID2Q5JVF3 399 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ZNF468Q5VIY5 522 aaPredicted RBP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 FGD2Q7Z6J4 655 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 CHERPQ8IWX8 916 aaKnown RBP13.27□□□□□ -0.29
PAAF1-204ENST00000504441 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ACBD4Q8NC06 268 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 M1APQ8TC57 530 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 PRAP1Q96NZ9 151 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 MMP25Q9NPA2 562 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 FAM114A2Q9NRY5 505 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 CRYL1Q9Y2S2 319 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 ASB1Q9Y576 335 aa13.27□□□□□ -0.29
PAAF1-204ENST00000504441 A0A1B0GTH9 108 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 GRID2IPA4D2P6 1211 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 GOLGA8TH3BQL2 631 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 NDC80O14777 642 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 CDC40O60508 579 aaKnown RBP eCLIP13.26□□□□□ -0.29
PAAF1-204ENST00000504441 NSA2O95478 260 aaKnown RBP13.26□□□□□ -0.29
PAAF1-204ENST00000504441 CATP04040 527 aaKnown RBP13.26□□□□□ -0.29
PAAF1-204ENST00000504441 NMBRP28336 390 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 RFC3P40938 356 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 ABRAXAS2Q15018 415 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 NSDHLQ15738 373 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 CD163Q86VB7 1156 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 CCDC170Q8IYT3 715 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 MPP5Q8N3R9 675 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 UBL4BQ8N7F7 174 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 LRRC57Q8N9N7 239 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 RNF214Q8ND24 703 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 ZNF480Q8WV37 535 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 PEX13Q92968 403 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 BIRC8Q96P09 236 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 LPAR4Q99677 370 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 ZNF559Q9BR84 538 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
PAAF1-204ENST00000504441 SCN2AQ99250 2005 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 ZNF860A6NHJ4 632 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 ZNF839A8K0R7 811 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 E5RI56 91 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 E7ENX8 843 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 TFECO14948 347 aaPredicted RBP13.25□□□□□ -0.29
PAAF1-204ENST00000504441 NME2P1O60361 137 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 RDH16O75452 317 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 PSIP1O75475 530 aaKnown RBP13.25□□□□□ -0.29
PAAF1-204ENST00000504441 VAPBO95292 243 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 NME2P22392 152 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 ATP5DP30049 168 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
PAAF1-204ENST00000504441 PTGS2P35354 604 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 HSD17B2P37059 387 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 BCL6P41182 706 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 ABATP80404 500 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 TAP2Q03519 686 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 SNX1Q13596 522 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 KCNJ11Q14654 390 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 ARHGAP19Q14CB8 494 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 MEI1Q5TIA1 1274 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
PAAF1-204ENST00000504441 SDCCAG8Q86SQ7 713 aaPredicted RBP13.25□□□□□ -0.29
PAAF1-204ENST00000504441 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms