RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ABRAXAS2Q15018 415 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 SCIMPQ6UWF3 145 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 WDR75Q8IWA0 830 aaKnown RBP19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 RNF175Q8N4F7 328 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 HUS1BQ8NHY5 278 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 SELENOMQ8WWX9 145 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 USP7Q93009 1102 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 FAR2Q96K12 515 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 CCDC74BQ96LY2 380 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 OR2A5Q96R48 311 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 HBEGFQ99075 208 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 MTERF1Q99551 399 aaKnown RBP19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 ZFYVE21Q9BQ24 234 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 RHBGQ9H310 441 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 TUBB1Q9H4B7 451 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 ZNF768Q9H5H4 540 aaKnown RBP19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 BTRCQ9Y297 605 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 PCDHGA4Q9Y5G9 962 aa19.53■□□□□ 0.72
CDC42SE2-206ENST00000503291 SLCO1B7G3V0H7 640 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 HDAC3O15379 428 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 MAP3K7O43318 606 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 SKAP2O75563 359 aaPredicted RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 PDYNP01213 254 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 ANKRD34CP0C6C1 535 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 ARL4DP49703 201 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 ZFP36L1Q07352 338 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 DDX39BQ13838 428 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 PDCD2Q16342 344 aaPredicted RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 PHF19Q5T6S3 580 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 RNF44Q7L0R7 432 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 SLCO6A1Q86UG4 719 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 KMT5CQ86Y97 462 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 DNAJC22Q8N4W6 341 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 MFSD9Q8NBP5 474 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 THOC1Q96FV9 657 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 SLC41A2Q96JW4 573 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 CHRNA10Q9GZZ6 450 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 MDC1Q14676 2089 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 SPAARA0A1B0GVQ0 90 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 ANKDD1BA6NHY2 528 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 SLC30A4O14863 429 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 HCRTR1O43613 425 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 TGDSO95455 350 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 JUNP05412 331 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 NELFEP18615 380 aaKnown RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 AHRP35869 848 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 MLLT3P42568 568 aaPredicted RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 HK2P52789 917 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 INSM1Q01101 510 aaPredicted RBP19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 VN1R5Q7Z5H4 357 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 B3GNT8Q7Z7M8 397 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 HOMEZQ8IX15 550 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 VTI1BQ9UEU0 232 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 ZFP69BQ9UJL9 534 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 TSC22D4Q9Y3Q8 395 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 PTGDR2Q9Y5Y4 395 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 USH1CQ9Y6N9 552 aa19.52■□□□□ 0.72
CDC42SE2-206ENST00000503291 LINC00032P0C843 101 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 CYP4F2P78329 520 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 KCNAB1Q14722 419 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 ZC3H12BQ5HYM0 836 aaKnown RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 FRMPD2BQ6IN97 320 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 CGB2Q6NT52 195 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 RBM44Q6ZP01 1051 aaKnown RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 DDIASQ8IXT1 998 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 D2HGDHQ8N465 521 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 TTLQ8NG68 377 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 PPP1R36Q96LQ0 422 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 NUF2Q9BZD4 464 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 FAM107BQ9H098 131 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 EPN3Q9H201 632 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 PRM3Q9NNZ6 103 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 NPHS2Q9NP85 383 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 AP1M2Q9Y6Q5 423 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 LOC105369274A0A096LPK9 316 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 LOC102723532A0A0G2JNH3 316 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 MAGEB17A8MXT2 336 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 ZNF195O14628 629 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 PIP5K1BO14986 540 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 CEACAM1P13688 526 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 PIK3CBP42338 1070 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 PDX1P52945 283 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 BTKQ06187 659 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 DEFB110Q30KQ9 67 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 C10orf62Q5T681 223 aaPredicted RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 DHRS13Q6UX07 377 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 MAVSQ7Z434 540 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 MCATQ8IVS2 390 aaKnown RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 OR4N4Q8N0Y3 316 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 ZNF473Q8WTR7 871 aaKnown RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 TRIM55Q9BYV6 548 aa19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 CDV3Q9UKY7 258 aaKnown RBP19.51■□□□□ 0.71
CDC42SE2-206ENST00000503291 CDK4P11802 303 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 DRD4P21917 467 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 GABRA4P48169 554 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 SIM1P81133 766 aaPredicted RBP19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 ZNF33BQ06732 778 aa19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 SF3A3Q12874 501 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDC42SE2-206ENST00000503291 TRA2AQ13595 282 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms