RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PLD3Q8IV08 490 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 SHISA5Q8N114 240 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
CCDC58-207ENST00000498466 OTUD6BQ8N6M0 293 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 PPFIBP2Q8ND30 876 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 PEX13Q92968 403 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 FAM136AQ96C01 138 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF559Q9BR84 538 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 CHRAC1Q9NRG0 131 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 HCN3Q9P1Z3 774 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 TNFRSF10DQ9UBN6 386 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
CCDC58-207ENST00000498466 FAM90A27PA6NNH2 459 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF839A8K0R7 811 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 MYO1CO00159 1063 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 SLC25A12O75746 678 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 NSA2O95478 260 aaKnown RBP13.12□□□□□ -0.31
CCDC58-207ENST00000498466 TPOP07202 933 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 IGFBP2P18065 325 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC58-207ENST00000498466 PTGER1P34995 402 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 RELAQ04206 551 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 ARHGAP19Q14CB8 494 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 CTSL3PQ5NE16 218 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 CD163Q86VB7 1156 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 MMP21Q8N119 569 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 SLC35B2Q8TB61 432 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
CCDC58-207ENST00000498466 PKP4Q99569 1192 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 LPAR4Q99677 370 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 OLFM1Q99784 485 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 EBNA1BP2Q99848 306 aaKnown RBP13.12□□□□□ -0.31
CCDC58-207ENST00000498466 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
CCDC58-207ENST00000498466 FAM114A2Q9NRY5 505 aa13.12□□□□□ -0.31
CCDC58-207ENST00000498466 NKX2-6A6NCS4 301 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 SGK494L7N484 410 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 SMAPO00193 183 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 NDC80O14777 642 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 NIPSNAP2O75323 286 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 IFNB1P01574 187 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
CCDC58-207ENST00000498466 IL1RNP18510 177 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 ATP5DP30049 168 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 FMO4P31512 558 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
CCDC58-207ENST00000498466 PTGS2P35354 604 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 HSD17B2P37059 387 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 FDFT1P37268 417 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 ABATP80404 500 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
CCDC58-207ENST00000498466 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 NSDHLQ15738 373 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 THEMIS2Q5TEJ8 643 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
CCDC58-207ENST00000498466 CCDC170Q8IYT3 715 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 NRGNQ92686 78 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 DUSP10Q9Y6W6 482 aa13.11□□□□□ -0.31
CCDC58-207ENST00000498466 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 H7BY64 318 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 TFECO14948 347 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 NME2P1O60361 137 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CDC40O60508 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 PSIP1O75475 530 aaKnown RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 SLC16A8O95907 504 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 SYF2O95926 243 aaKnown RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 APRTP07741 180 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CHRM3P20309 590 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 NME2P22392 152 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CHRNB4P30926 498 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 STIP1P31948 543 aaKnown RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CYLC1P35663 651 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 BCL6P41182 706 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 IST1P53990 364 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 GBX1Q14549 363 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 USP10Q14694 798 aaKnown RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 ACSBG2Q5FVE4 666 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 CES4AQ5XG92 561 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 TMEM211Q6ICI0 200 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-207ENST00000498466 LGI4Q8N135 537 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 MARVELD2Q8N4S9 558 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 ZNF480Q8WV37 535 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 ATG4AQ8WYN0 398 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 TMEM125Q96AQ2 219 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 PRAP1Q96NZ9 151 aa13.1□□□□□ -0.31
CCDC58-207ENST00000498466 BIRC8Q96P09 236 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms